Protein–RNA interactions for Protein: Q99942

RNF5, E3 ubiquitin-protein ligase RNF5, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF5Q99942 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
RNF5Q99942 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF5Q99942 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC18.78■□□□□ 0.6
RNF5Q99942 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF5Q99942 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC18.78■□□□□ 0.6
RNF5Q99942 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF5Q99942 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF5Q99942 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC18.77■□□□□ 0.6
RNF5Q99942 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF5Q99942 ATP5G2P3-201ENST00000429083 425 ntBASIC18.77■□□□□ 0.6
RNF5Q99942 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RNF5Q99942 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RNF5Q99942 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF5Q99942 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC18.77■□□□□ 0.6
RNF5Q99942 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RNF5Q99942 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF5Q99942 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF5Q99942 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
RNF5Q99942 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC18.76■□□□□ 0.59
RNF5Q99942 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF5Q99942 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF5Q99942 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RNF5Q99942 AC090877.2-201ENST00000558441 1738 ntBASIC18.75■□□□□ 0.59
RNF5Q99942 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC18.75■□□□□ 0.59
RNF5Q99942 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF5Q99942 TSPY13P-201ENST00000338964 914 ntBASIC18.75■□□□□ 0.59
RNF5Q99942 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC18.75■□□□□ 0.59
RNF5Q99942 AC004987.1-201ENST00000428627 508 ntBASIC18.75■□□□□ 0.59
RNF5Q99942 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC18.75■□□□□ 0.59
RNF5Q99942 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC18.75■□□□□ 0.59
RNF5Q99942 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
RNF5Q99942 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF5Q99942 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF5Q99942 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF5Q99942 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF5Q99942 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
RNF5Q99942 DUX4L18-201ENST00000553347 1267 ntBASIC18.74■□□□□ 0.59
RNF5Q99942 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
RNF5Q99942 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC18.74■□□□□ 0.59
RNF5Q99942 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF5Q99942 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF5Q99942 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
RNF5Q99942 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF5Q99942 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
RNF5Q99942 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF5Q99942 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF5Q99942 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF5Q99942 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF5Q99942 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF5Q99942 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
RNF5Q99942 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF5Q99942 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
RNF5Q99942 AC012354.3-201ENST00000623734 483 ntBASIC18.73■□□□□ 0.59
RNF5Q99942 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF5Q99942 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC18.73■□□□□ 0.59
RNF5Q99942 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF5Q99942 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
RNF5Q99942 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF5Q99942 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC18.72■□□□□ 0.59
RNF5Q99942 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
RNF5Q99942 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC18.72■□□□□ 0.59
RNF5Q99942 BHLHE23-202ENST00000612929 1109 ntBASIC18.72■□□□□ 0.59
RNF5Q99942 AC011551.1-201ENST00000614101 683 ntBASIC18.72■□□□□ 0.59
RNF5Q99942 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
RNF5Q99942 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF5Q99942 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RNF5Q99942 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RNF5Q99942 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC18.71■□□□□ 0.59
RNF5Q99942 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RNF5Q99942 IDNK-201ENST00000376417 511 ntTSL 5 BASIC18.71■□□□□ 0.59
RNF5Q99942 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF5Q99942 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RNF5Q99942 LINC00543-201ENST00000567234 1845 ntBASIC18.71■□□□□ 0.59
RNF5Q99942 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
RNF5Q99942 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF5Q99942 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC18.7■□□□□ 0.58
RNF5Q99942 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC18.7■□□□□ 0.58
RNF5Q99942 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RNF5Q99942 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC18.7■□□□□ 0.58
RNF5Q99942 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC18.7■□□□□ 0.58
RNF5Q99942 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF5Q99942 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF5Q99942 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF5Q99942 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
RNF5Q99942 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF5Q99942 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC18.69■□□□□ 0.58
RNF5Q99942 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RNF5Q99942 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF5Q99942 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RNF5Q99942 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF5Q99942 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RNF5Q99942 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF5Q99942 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF5Q99942 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RNF5Q99942 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC18.68■□□□□ 0.58
RNF5Q99942 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF5Q99942 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF5Q99942 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF5Q99942 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC18.68■□□□□ 0.58
RNF5Q99942 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms