Protein–RNA interactions for Protein: Q96TA0

PCDHB18P, Putative protocadherin beta-18, humanhuman

Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18PQ96TA0 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
PCDHB18PQ96TA0 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
PCDHB18PQ96TA0 THRA-202ENST00000394121 2260 ntTSL 2 BASIC24.96■■□□□ 1.59
PCDHB18PQ96TA0 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC24.96■■□□□ 1.59
PCDHB18PQ96TA0 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC24.96■■□□□ 1.59
PCDHB18PQ96TA0 AC087393.1-201ENST00000582896 145 ntBASIC24.96■■□□□ 1.59
PCDHB18PQ96TA0 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
PCDHB18PQ96TA0 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
PCDHB18PQ96TA0 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
PCDHB18PQ96TA0 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
PCDHB18PQ96TA0 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC24.95■■□□□ 1.59
PCDHB18PQ96TA0 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
PCDHB18PQ96TA0 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.58
PCDHB18PQ96TA0 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
PCDHB18PQ96TA0 IDNK-203ENST00000405990 629 ntTSL 2 BASIC24.95■■□□□ 1.58
PCDHB18PQ96TA0 MIR6765-201ENST00000614092 87 ntBASIC24.95■■□□□ 1.58
PCDHB18PQ96TA0 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC24.95■■□□□ 1.58
PCDHB18PQ96TA0 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC24.95■■□□□ 1.58
PCDHB18PQ96TA0 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
PCDHB18PQ96TA0 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
PCDHB18PQ96TA0 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC24.95■■□□□ 1.58
PCDHB18PQ96TA0 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC24.95■■□□□ 1.58
PCDHB18PQ96TA0 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
PCDHB18PQ96TA0 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC24.94■■□□□ 1.58
PCDHB18PQ96TA0 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
PCDHB18PQ96TA0 LINC00543-201ENST00000567234 1845 ntBASIC24.94■■□□□ 1.58
PCDHB18PQ96TA0 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC24.94■■□□□ 1.58
PCDHB18PQ96TA0 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
PCDHB18PQ96TA0 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
PCDHB18PQ96TA0 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
PCDHB18PQ96TA0 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC24.94■■□□□ 1.58
PCDHB18PQ96TA0 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
PCDHB18PQ96TA0 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC24.93■■□□□ 1.58
PCDHB18PQ96TA0 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC24.93■■□□□ 1.58
PCDHB18PQ96TA0 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
PCDHB18PQ96TA0 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
PCDHB18PQ96TA0 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC24.93■■□□□ 1.58
PCDHB18PQ96TA0 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
PCDHB18PQ96TA0 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC24.93■■□□□ 1.58
PCDHB18PQ96TA0 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
PCDHB18PQ96TA0 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC24.93■■□□□ 1.58
PCDHB18PQ96TA0 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
PCDHB18PQ96TA0 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
PCDHB18PQ96TA0 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
PCDHB18PQ96TA0 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
PCDHB18PQ96TA0 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
PCDHB18PQ96TA0 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC24.92■■□□□ 1.58
PCDHB18PQ96TA0 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
PCDHB18PQ96TA0 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC24.92■■□□□ 1.58
PCDHB18PQ96TA0 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
PCDHB18PQ96TA0 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
PCDHB18PQ96TA0 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
PCDHB18PQ96TA0 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC24.91■■□□□ 1.58
PCDHB18PQ96TA0 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC24.91■■□□□ 1.58
PCDHB18PQ96TA0 HLA-L-211ENST00000482052 1765 ntBASIC24.91■■□□□ 1.58
PCDHB18PQ96TA0 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC24.91■■□□□ 1.58
PCDHB18PQ96TA0 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
PCDHB18PQ96TA0 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
PCDHB18PQ96TA0 ABHD17AP5-201ENST00000580133 923 ntBASIC24.91■■□□□ 1.58
PCDHB18PQ96TA0 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC24.91■■□□□ 1.58
PCDHB18PQ96TA0 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC24.9■■□□□ 1.58
PCDHB18PQ96TA0 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
PCDHB18PQ96TA0 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
PCDHB18PQ96TA0 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC24.9■■□□□ 1.58
PCDHB18PQ96TA0 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC24.9■■□□□ 1.58
PCDHB18PQ96TA0 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC24.9■■□□□ 1.58
PCDHB18PQ96TA0 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
PCDHB18PQ96TA0 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC24.9■■□□□ 1.58
PCDHB18PQ96TA0 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
PCDHB18PQ96TA0 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
PCDHB18PQ96TA0 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC24.89■■□□□ 1.58
PCDHB18PQ96TA0 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
PCDHB18PQ96TA0 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
PCDHB18PQ96TA0 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC24.88■■□□□ 1.57
PCDHB18PQ96TA0 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC24.88■■□□□ 1.57
PCDHB18PQ96TA0 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC24.88■■□□□ 1.57
PCDHB18PQ96TA0 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
PCDHB18PQ96TA0 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC24.88■■□□□ 1.57
PCDHB18PQ96TA0 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
PCDHB18PQ96TA0 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC24.87■■□□□ 1.57
PCDHB18PQ96TA0 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
PCDHB18PQ96TA0 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
PCDHB18PQ96TA0 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
PCDHB18PQ96TA0 NTF6A-201ENST00000591175 560 ntBASIC24.87■■□□□ 1.57
PCDHB18PQ96TA0 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
PCDHB18PQ96TA0 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC24.87■■□□□ 1.57
PCDHB18PQ96TA0 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
PCDHB18PQ96TA0 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
PCDHB18PQ96TA0 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC24.86■■□□□ 1.57
PCDHB18PQ96TA0 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC24.86■■□□□ 1.57
PCDHB18PQ96TA0 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC24.85■■□□□ 1.57
PCDHB18PQ96TA0 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
PCDHB18PQ96TA0 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
PCDHB18PQ96TA0 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
PCDHB18PQ96TA0 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC24.85■■□□□ 1.57
PCDHB18PQ96TA0 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC24.85■■□□□ 1.57
PCDHB18PQ96TA0 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC24.85■■□□□ 1.57
PCDHB18PQ96TA0 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC24.85■■□□□ 1.57
PCDHB18PQ96TA0 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
PCDHB18PQ96TA0 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms