Protein–RNA interactions for Protein: Q96N35

LINC00052, Putative uncharacterized protein encoded by LINC00052, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00052Q96N35 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LINC00052Q96N35 AC044849.2-201ENST00000606596 710 ntBASIC19.23■□□□□ 0.67
LINC00052Q96N35 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LINC00052Q96N35 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LINC00052Q96N35 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LINC00052Q96N35 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC19.23■□□□□ 0.67
LINC00052Q96N35 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LINC00052Q96N35 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LINC00052Q96N35 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.23■□□□□ 0.67
LINC00052Q96N35 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
LINC00052Q96N35 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.22■□□□□ 0.67
LINC00052Q96N35 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
LINC00052Q96N35 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
LINC00052Q96N35 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LINC00052Q96N35 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
LINC00052Q96N35 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
LINC00052Q96N35 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LINC00052Q96N35 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LINC00052Q96N35 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LINC00052Q96N35 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.22■□□□□ 0.67
LINC00052Q96N35 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LINC00052Q96N35 AL137060.1-201ENST00000618151 2648 ntBASIC19.21■□□□□ 0.67
LINC00052Q96N35 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
LINC00052Q96N35 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LINC00052Q96N35 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LINC00052Q96N35 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LINC00052Q96N35 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
LINC00052Q96N35 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
LINC00052Q96N35 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LINC00052Q96N35 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LINC00052Q96N35 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
LINC00052Q96N35 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
LINC00052Q96N35 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LINC00052Q96N35 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
LINC00052Q96N35 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
LINC00052Q96N35 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
LINC00052Q96N35 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC19.2■□□□□ 0.66
LINC00052Q96N35 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
LINC00052Q96N35 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LINC00052Q96N35 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LINC00052Q96N35 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
LINC00052Q96N35 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LINC00052Q96N35 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LINC00052Q96N35 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
LINC00052Q96N35 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
LINC00052Q96N35 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.19■□□□□ 0.66
LINC00052Q96N35 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.19■□□□□ 0.66
LINC00052Q96N35 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LINC00052Q96N35 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LINC00052Q96N35 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.18■□□□□ 0.66
LINC00052Q96N35 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LINC00052Q96N35 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LINC00052Q96N35 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.18■□□□□ 0.66
LINC00052Q96N35 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
LINC00052Q96N35 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LINC00052Q96N35 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LINC00052Q96N35 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LINC00052Q96N35 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LINC00052Q96N35 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.17■□□□□ 0.66
LINC00052Q96N35 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LINC00052Q96N35 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
LINC00052Q96N35 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LINC00052Q96N35 BOD1-206ENST00000480951 814 ntTSL 2 BASIC19.17■□□□□ 0.66
LINC00052Q96N35 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC19.17■□□□□ 0.66
LINC00052Q96N35 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LINC00052Q96N35 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LINC00052Q96N35 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.17■□□□□ 0.66
LINC00052Q96N35 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
LINC00052Q96N35 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LINC00052Q96N35 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LINC00052Q96N35 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC19.16■□□□□ 0.66
LINC00052Q96N35 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.16■□□□□ 0.66
LINC00052Q96N35 AC135983.2-203ENST00000454486 1613 ntBASIC19.16■□□□□ 0.66
LINC00052Q96N35 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LINC00052Q96N35 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
LINC00052Q96N35 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
LINC00052Q96N35 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.16■□□□□ 0.66
LINC00052Q96N35 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LINC00052Q96N35 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LINC00052Q96N35 MEST-211ENST00000437945 1455 ntTSL 5 BASIC19.16■□□□□ 0.66
LINC00052Q96N35 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LINC00052Q96N35 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
LINC00052Q96N35 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
LINC00052Q96N35 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
LINC00052Q96N35 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LINC00052Q96N35 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LINC00052Q96N35 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LINC00052Q96N35 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LINC00052Q96N35 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LINC00052Q96N35 LINC00273-201ENST00000539813 1452 ntBASIC19.15■□□□□ 0.66
LINC00052Q96N35 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LINC00052Q96N35 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC19.14■□□□□ 0.66
LINC00052Q96N35 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC19.14■□□□□ 0.66
LINC00052Q96N35 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
LINC00052Q96N35 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC19.14■□□□□ 0.65
LINC00052Q96N35 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC19.14■□□□□ 0.65
LINC00052Q96N35 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LINC00052Q96N35 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LINC00052Q96N35 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.13■□□□□ 0.65
LINC00052Q96N35 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms