Protein–RNA interactions for Protein: Q96EE3

SEH1L, Nucleoporin SEH1, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1LQ96EE3 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SEH1LQ96EE3 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
SEH1LQ96EE3 AC097639.1-201ENST00000565519 1891 ntBASIC20.33■□□□□ 0.84
SEH1LQ96EE3 HYI-213ENST00000583037 1322 ntTSL 5 BASIC20.32■□□□□ 0.84
SEH1LQ96EE3 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.32■□□□□ 0.84
SEH1LQ96EE3 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SEH1LQ96EE3 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SEH1LQ96EE3 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SEH1LQ96EE3 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
SEH1LQ96EE3 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
SEH1LQ96EE3 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SEH1LQ96EE3 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SEH1LQ96EE3 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
SEH1LQ96EE3 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SEH1LQ96EE3 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SEH1LQ96EE3 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SEH1LQ96EE3 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SEH1LQ96EE3 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SEH1LQ96EE3 RAP2CP1-202ENST00000605179 643 ntBASIC20.31■□□□□ 0.84
SEH1LQ96EE3 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SEH1LQ96EE3 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.31■□□□□ 0.84
SEH1LQ96EE3 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
SEH1LQ96EE3 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
SEH1LQ96EE3 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SEH1LQ96EE3 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SEH1LQ96EE3 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SEH1LQ96EE3 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SEH1LQ96EE3 AC133552.2-201ENST00000619106 1032 ntBASIC20.3■□□□□ 0.84
SEH1LQ96EE3 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SEH1LQ96EE3 AC068473.5-201ENST00000616428 2072 ntBASIC20.3■□□□□ 0.84
SEH1LQ96EE3 LINC00543-201ENST00000567234 1845 ntBASIC20.3■□□□□ 0.84
SEH1LQ96EE3 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SEH1LQ96EE3 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SEH1LQ96EE3 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.29■□□□□ 0.84
SEH1LQ96EE3 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.29■□□□□ 0.84
SEH1LQ96EE3 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.29■□□□□ 0.84
SEH1LQ96EE3 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
SEH1LQ96EE3 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.29■□□□□ 0.84
SEH1LQ96EE3 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
SEH1LQ96EE3 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SEH1LQ96EE3 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SEH1LQ96EE3 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
SEH1LQ96EE3 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SEH1LQ96EE3 U85056.1-201ENST00000616429 682 ntBASIC20.28■□□□□ 0.84
SEH1LQ96EE3 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SEH1LQ96EE3 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SEH1LQ96EE3 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SEH1LQ96EE3 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SEH1LQ96EE3 SLC6A10P-202ENST00000431994 2058 ntBASIC20.28■□□□□ 0.84
SEH1LQ96EE3 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.28■□□□□ 0.84
SEH1LQ96EE3 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SEH1LQ96EE3 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
SEH1LQ96EE3 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.27■□□□□ 0.84
SEH1LQ96EE3 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
SEH1LQ96EE3 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.27■□□□□ 0.84
SEH1LQ96EE3 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SEH1LQ96EE3 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SEH1LQ96EE3 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SEH1LQ96EE3 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
SEH1LQ96EE3 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SEH1LQ96EE3 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SEH1LQ96EE3 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SEH1LQ96EE3 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SEH1LQ96EE3 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SEH1LQ96EE3 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SEH1LQ96EE3 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SEH1LQ96EE3 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SEH1LQ96EE3 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.25■□□□□ 0.83
SEH1LQ96EE3 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.25■□□□□ 0.83
SEH1LQ96EE3 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SEH1LQ96EE3 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SEH1LQ96EE3 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.25■□□□□ 0.83
SEH1LQ96EE3 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SEH1LQ96EE3 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SEH1LQ96EE3 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
SEH1LQ96EE3 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SEH1LQ96EE3 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SEH1LQ96EE3 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SEH1LQ96EE3 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SEH1LQ96EE3 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SEH1LQ96EE3 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.24■□□□□ 0.83
SEH1LQ96EE3 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SEH1LQ96EE3 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SEH1LQ96EE3 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.24■□□□□ 0.83
SEH1LQ96EE3 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SEH1LQ96EE3 AL592293.1-201ENST00000502889 1188 ntBASIC20.24■□□□□ 0.83
SEH1LQ96EE3 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.24■□□□□ 0.83
SEH1LQ96EE3 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
SEH1LQ96EE3 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
SEH1LQ96EE3 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SEH1LQ96EE3 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.23■□□□□ 0.83
SEH1LQ96EE3 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SEH1LQ96EE3 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SEH1LQ96EE3 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SEH1LQ96EE3 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.23■□□□□ 0.83
SEH1LQ96EE3 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SEH1LQ96EE3 ABHD17AP5-201ENST00000580133 923 ntBASIC20.23■□□□□ 0.83
SEH1LQ96EE3 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
SEH1LQ96EE3 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SEH1LQ96EE3 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms