Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC30.47■■■□□ 2.47
SMARCC1Q92922 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC30.47■■■□□ 2.47
SMARCC1Q92922 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
SMARCC1Q92922 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
SMARCC1Q92922 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
SMARCC1Q92922 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
SMARCC1Q92922 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC30.46■■■□□ 2.47
SMARCC1Q92922 AL136162.1-201ENST00000607711 1078 ntBASIC30.46■■■□□ 2.47
SMARCC1Q92922 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC30.46■■■□□ 2.47
SMARCC1Q92922 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC30.46■■■□□ 2.47
SMARCC1Q92922 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
SMARCC1Q92922 AC092666.2-201ENST00000613287 246 ntBASIC30.45■■■□□ 2.47
SMARCC1Q92922 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC30.44■■■□□ 2.46
SMARCC1Q92922 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
SMARCC1Q92922 AC026271.2-201ENST00000428091 497 ntBASIC30.44■■■□□ 2.46
SMARCC1Q92922 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
SMARCC1Q92922 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
SMARCC1Q92922 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC30.43■■■□□ 2.46
SMARCC1Q92922 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
SMARCC1Q92922 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
SMARCC1Q92922 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC30.42■■■□□ 2.46
SMARCC1Q92922 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC30.42■■■□□ 2.46
SMARCC1Q92922 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC30.42■■■□□ 2.46
SMARCC1Q92922 AC135279.3-201ENST00000610945 1311 ntBASIC30.42■■■□□ 2.46
SMARCC1Q92922 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC30.41■■■□□ 2.46
SMARCC1Q92922 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC30.41■■■□□ 2.46
SMARCC1Q92922 SHF-208ENST00000560734 1731 ntTSL 3 BASIC30.41■■■□□ 2.46
SMARCC1Q92922 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
SMARCC1Q92922 AC090877.2-201ENST00000558441 1738 ntBASIC30.4■■■□□ 2.46
SMARCC1Q92922 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC30.4■■■□□ 2.46
SMARCC1Q92922 EDA-201ENST00000338901 1233 ntBASIC30.4■■■□□ 2.46
SMARCC1Q92922 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
SMARCC1Q92922 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC30.4■■■□□ 2.46
SMARCC1Q92922 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
SMARCC1Q92922 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC30.4■■■□□ 2.46
SMARCC1Q92922 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC30.39■■■□□ 2.46
SMARCC1Q92922 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
SMARCC1Q92922 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
SMARCC1Q92922 SRD5A1P1-201ENST00000442297 786 ntBASIC30.38■■■□□ 2.45
SMARCC1Q92922 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC30.38■■■□□ 2.45
SMARCC1Q92922 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC30.38■■■□□ 2.45
SMARCC1Q92922 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC30.38■■■□□ 2.45
SMARCC1Q92922 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC30.38■■■□□ 2.45
SMARCC1Q92922 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC30.37■■■□□ 2.45
SMARCC1Q92922 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
SMARCC1Q92922 LGR4-203ENST00000480977 492 ntTSL 2 BASIC30.37■■■□□ 2.45
SMARCC1Q92922 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC30.37■■■□□ 2.45
SMARCC1Q92922 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC30.37■■■□□ 2.45
SMARCC1Q92922 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC30.37■■■□□ 2.45
SMARCC1Q92922 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC30.37■■■□□ 2.45
SMARCC1Q92922 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC30.37■■■□□ 2.45
SMARCC1Q92922 AL355001.2-201ENST00000620617 1191 ntBASIC30.37■■■□□ 2.45
SMARCC1Q92922 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC30.37■■■□□ 2.45
SMARCC1Q92922 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
SMARCC1Q92922 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC30.37■■■□□ 2.45
SMARCC1Q92922 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
SMARCC1Q92922 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC30.36■■■□□ 2.45
SMARCC1Q92922 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC30.36■■■□□ 2.45
SMARCC1Q92922 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
SMARCC1Q92922 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC30.36■■■□□ 2.45
SMARCC1Q92922 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
SMARCC1Q92922 LBH-205ENST00000407930 756 ntTSL 2 BASIC30.35■■■□□ 2.45
SMARCC1Q92922 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC30.35■■■□□ 2.45
SMARCC1Q92922 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC30.35■■■□□ 2.45
SMARCC1Q92922 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC30.35■■■□□ 2.45
SMARCC1Q92922 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC30.35■■■□□ 2.45
SMARCC1Q92922 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
SMARCC1Q92922 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
SMARCC1Q92922 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC30.34■■■□□ 2.45
SMARCC1Q92922 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC30.34■■■□□ 2.45
SMARCC1Q92922 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC30.34■■■□□ 2.45
SMARCC1Q92922 AC024257.2-201ENST00000549699 147 ntBASIC30.34■■■□□ 2.45
SMARCC1Q92922 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
SMARCC1Q92922 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
SMARCC1Q92922 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
SMARCC1Q92922 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
SMARCC1Q92922 MIR5787-201ENST00000611784 55 ntBASIC30.32■■■□□ 2.44
SMARCC1Q92922 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
SMARCC1Q92922 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
SMARCC1Q92922 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
SMARCC1Q92922 HYI-206ENST00000372434 1025 ntTSL 5 BASIC30.31■■■□□ 2.44
SMARCC1Q92922 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC30.31■■■□□ 2.44
SMARCC1Q92922 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
SMARCC1Q92922 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
SMARCC1Q92922 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
SMARCC1Q92922 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
SMARCC1Q92922 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC30.3■■■□□ 2.44
SMARCC1Q92922 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
SMARCC1Q92922 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
SMARCC1Q92922 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
SMARCC1Q92922 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
SMARCC1Q92922 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC30.29■■■□□ 2.44
SMARCC1Q92922 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC30.29■■■□□ 2.44
SMARCC1Q92922 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC30.29■■■□□ 2.44
SMARCC1Q92922 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
SMARCC1Q92922 AC104564.3-201ENST00000582367 638 ntBASIC30.29■■■□□ 2.44
SMARCC1Q92922 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC30.29■■■□□ 2.44
SMARCC1Q92922 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
SMARCC1Q92922 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC30.29■■■□□ 2.44
SMARCC1Q92922 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms