Protein–RNA interactions for Protein: Q8WWA1

TMEM40, Transmembrane protein 40, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40Q8WWA1 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC25.82■■□□□ 1.72
TMEM40Q8WWA1 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
TMEM40Q8WWA1 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC25.82■■□□□ 1.72
TMEM40Q8WWA1 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
TMEM40Q8WWA1 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
TMEM40Q8WWA1 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
TMEM40Q8WWA1 PEMT-206ENST00000435340 960 ntTSL 5 BASIC25.81■■□□□ 1.72
TMEM40Q8WWA1 AC010997.5-201ENST00000609182 354 ntBASIC25.81■■□□□ 1.72
TMEM40Q8WWA1 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC25.81■■□□□ 1.72
TMEM40Q8WWA1 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
TMEM40Q8WWA1 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
TMEM40Q8WWA1 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC25.8■■□□□ 1.72
TMEM40Q8WWA1 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC25.8■■□□□ 1.72
TMEM40Q8WWA1 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC25.8■■□□□ 1.72
TMEM40Q8WWA1 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
TMEM40Q8WWA1 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
TMEM40Q8WWA1 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
TMEM40Q8WWA1 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
TMEM40Q8WWA1 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC25.79■■□□□ 1.72
TMEM40Q8WWA1 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC25.79■■□□□ 1.72
TMEM40Q8WWA1 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
TMEM40Q8WWA1 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC25.79■■□□□ 1.72
TMEM40Q8WWA1 LSM4-201ENST00000252816 986 ntTSL 2 BASIC25.79■■□□□ 1.72
TMEM40Q8WWA1 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
TMEM40Q8WWA1 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC25.79■■□□□ 1.72
TMEM40Q8WWA1 TRIR-202ENST00000588213 841 ntTSL 3 BASIC25.79■■□□□ 1.72
TMEM40Q8WWA1 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
TMEM40Q8WWA1 AC092803.2-201ENST00000564287 1899 ntBASIC25.79■■□□□ 1.72
TMEM40Q8WWA1 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC25.78■■□□□ 1.72
TMEM40Q8WWA1 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
TMEM40Q8WWA1 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC25.78■■□□□ 1.72
TMEM40Q8WWA1 AC019069.1-201ENST00000610008 1333 ntBASIC25.78■■□□□ 1.72
TMEM40Q8WWA1 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
TMEM40Q8WWA1 AC090877.2-201ENST00000558441 1738 ntBASIC25.77■■□□□ 1.72
TMEM40Q8WWA1 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC25.77■■□□□ 1.72
TMEM40Q8WWA1 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
TMEM40Q8WWA1 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC25.77■■□□□ 1.72
TMEM40Q8WWA1 MTDHP2-201ENST00000601468 714 ntBASIC25.77■■□□□ 1.72
TMEM40Q8WWA1 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC25.77■■□□□ 1.72
TMEM40Q8WWA1 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC25.77■■□□□ 1.72
TMEM40Q8WWA1 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC25.77■■□□□ 1.72
TMEM40Q8WWA1 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
TMEM40Q8WWA1 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.72
TMEM40Q8WWA1 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
TMEM40Q8WWA1 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC25.76■■□□□ 1.71
TMEM40Q8WWA1 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC25.76■■□□□ 1.71
TMEM40Q8WWA1 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC25.76■■□□□ 1.71
TMEM40Q8WWA1 AC131281.2-201ENST00000520478 145 ntBASIC25.76■■□□□ 1.71
TMEM40Q8WWA1 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC25.76■■□□□ 1.71
TMEM40Q8WWA1 CLTA-210ENST00000540080 989 ntTSL 2 BASIC25.76■■□□□ 1.71
TMEM40Q8WWA1 AL117332.1-201ENST00000622628 974 ntBASIC25.76■■□□□ 1.71
TMEM40Q8WWA1 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC25.76■■□□□ 1.71
TMEM40Q8WWA1 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
TMEM40Q8WWA1 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC25.76■■□□□ 1.71
TMEM40Q8WWA1 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC25.75■■□□□ 1.71
TMEM40Q8WWA1 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC25.75■■□□□ 1.71
TMEM40Q8WWA1 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
TMEM40Q8WWA1 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC25.75■■□□□ 1.71
TMEM40Q8WWA1 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
TMEM40Q8WWA1 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC25.75■■□□□ 1.71
TMEM40Q8WWA1 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC25.75■■□□□ 1.71
TMEM40Q8WWA1 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
TMEM40Q8WWA1 RPP21-222ENST00000433076 577 ntTSL 2 BASIC25.74■■□□□ 1.71
TMEM40Q8WWA1 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC25.74■■□□□ 1.71
TMEM40Q8WWA1 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
TMEM40Q8WWA1 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC25.73■■□□□ 1.71
TMEM40Q8WWA1 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
TMEM40Q8WWA1 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC25.73■■□□□ 1.71
TMEM40Q8WWA1 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC25.73■■□□□ 1.71
TMEM40Q8WWA1 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
TMEM40Q8WWA1 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC25.73■■□□□ 1.71
TMEM40Q8WWA1 SRR-208ENST00000576848 588 ntTSL 4 BASIC25.73■■□□□ 1.71
TMEM40Q8WWA1 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC25.73■■□□□ 1.71
TMEM40Q8WWA1 MIR6724-1-201ENST00000616420 92 ntBASIC25.73■■□□□ 1.71
TMEM40Q8WWA1 MIR6724-2-201ENST00000616483 92 ntBASIC25.73■■□□□ 1.71
TMEM40Q8WWA1 MIR6724-4-201ENST00000617390 92 ntBASIC25.73■■□□□ 1.71
TMEM40Q8WWA1 MIR6724-3-201ENST00000622482 92 ntBASIC25.73■■□□□ 1.71
TMEM40Q8WWA1 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC25.72■■□□□ 1.71
TMEM40Q8WWA1 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC25.72■■□□□ 1.71
TMEM40Q8WWA1 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
TMEM40Q8WWA1 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
TMEM40Q8WWA1 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC25.72■■□□□ 1.71
TMEM40Q8WWA1 MIR3621-201ENST00000580529 85 ntBASIC25.72■■□□□ 1.71
TMEM40Q8WWA1 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC25.72■■□□□ 1.71
TMEM40Q8WWA1 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC25.72■■□□□ 1.71
TMEM40Q8WWA1 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
TMEM40Q8WWA1 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC25.72■■□□□ 1.71
TMEM40Q8WWA1 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
TMEM40Q8WWA1 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC25.71■■□□□ 1.71
TMEM40Q8WWA1 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC25.71■■□□□ 1.71
TMEM40Q8WWA1 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC25.71■■□□□ 1.71
TMEM40Q8WWA1 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC25.71■■□□□ 1.71
TMEM40Q8WWA1 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC25.71■■□□□ 1.71
TMEM40Q8WWA1 EXOG-217ENST00000630638 197 ntTSL 5 BASIC25.71■■□□□ 1.71
TMEM40Q8WWA1 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC25.71■■□□□ 1.71
TMEM40Q8WWA1 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC25.7■■□□□ 1.71
TMEM40Q8WWA1 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
TMEM40Q8WWA1 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC25.7■■□□□ 1.7
TMEM40Q8WWA1 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC25.7■■□□□ 1.7
TMEM40Q8WWA1 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms