Protein–RNA interactions for Protein: Q8TD43

TRPM4, Transient receptor potential cation channel subfamily M member 4, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4Q8TD43 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC28.32■■■□□ 2.12
TRPM4Q8TD43 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
TRPM4Q8TD43 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
TRPM4Q8TD43 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
TRPM4Q8TD43 AL355001.2-201ENST00000620617 1191 ntBASIC28.31■■■□□ 2.12
TRPM4Q8TD43 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC28.31■■■□□ 2.12
TRPM4Q8TD43 AC139426.1-201ENST00000568218 2529 ntBASIC28.31■■■□□ 2.12
TRPM4Q8TD43 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC28.3■■■□□ 2.12
TRPM4Q8TD43 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
TRPM4Q8TD43 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC28.3■■■□□ 2.12
TRPM4Q8TD43 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC28.3■■■□□ 2.12
TRPM4Q8TD43 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC28.3■■■□□ 2.12
TRPM4Q8TD43 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
TRPM4Q8TD43 MIR6722-201ENST00000617286 78 ntBASIC28.3■■■□□ 2.12
TRPM4Q8TD43 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC28.3■■■□□ 2.12
TRPM4Q8TD43 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
TRPM4Q8TD43 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC28.29■■■□□ 2.12
TRPM4Q8TD43 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC28.29■■■□□ 2.12
TRPM4Q8TD43 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
TRPM4Q8TD43 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
TRPM4Q8TD43 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
TRPM4Q8TD43 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC28.29■■■□□ 2.12
TRPM4Q8TD43 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC28.29■■■□□ 2.12
TRPM4Q8TD43 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC28.29■■■□□ 2.12
TRPM4Q8TD43 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC28.29■■■□□ 2.12
TRPM4Q8TD43 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC28.28■■■□□ 2.12
TRPM4Q8TD43 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC28.27■■■□□ 2.12
TRPM4Q8TD43 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC28.27■■■□□ 2.12
TRPM4Q8TD43 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
TRPM4Q8TD43 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC28.27■■■□□ 2.12
TRPM4Q8TD43 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC28.27■■■□□ 2.12
TRPM4Q8TD43 ANKRD20A6P-201ENST00000618763 204 ntBASIC28.27■■■□□ 2.12
TRPM4Q8TD43 AL136967.2-201ENST00000623968 743 ntBASIC28.27■■■□□ 2.12
TRPM4Q8TD43 ST7-205ENST00000393446 2114 ntTSL 5 BASIC28.27■■■□□ 2.12
TRPM4Q8TD43 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC28.26■■■□□ 2.11
TRPM4Q8TD43 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
TRPM4Q8TD43 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
TRPM4Q8TD43 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
TRPM4Q8TD43 SRD5A1P1-201ENST00000442297 786 ntBASIC28.26■■■□□ 2.11
TRPM4Q8TD43 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC28.26■■■□□ 2.11
TRPM4Q8TD43 AF213884.3-201ENST00000563833 479 ntBASIC28.26■■■□□ 2.11
TRPM4Q8TD43 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
TRPM4Q8TD43 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
TRPM4Q8TD43 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC28.25■■■□□ 2.11
TRPM4Q8TD43 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
TRPM4Q8TD43 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC28.24■■■□□ 2.11
TRPM4Q8TD43 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
TRPM4Q8TD43 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
TRPM4Q8TD43 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
TRPM4Q8TD43 FOXO3B-201ENST00000395675 1928 ntBASIC28.23■■■□□ 2.11
TRPM4Q8TD43 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC28.22■■■□□ 2.11
TRPM4Q8TD43 GRAMD4P4-201ENST00000613563 1115 ntBASIC28.22■■■□□ 2.11
TRPM4Q8TD43 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
TRPM4Q8TD43 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC28.21■■■□□ 2.11
TRPM4Q8TD43 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
TRPM4Q8TD43 STOX2-205ENST00000513034 807 ntTSL 3 BASIC28.21■■■□□ 2.11
TRPM4Q8TD43 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
TRPM4Q8TD43 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
TRPM4Q8TD43 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC28.21■■■□□ 2.11
TRPM4Q8TD43 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
TRPM4Q8TD43 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC28.2■■■□□ 2.11
TRPM4Q8TD43 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
TRPM4Q8TD43 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC28.2■■■□□ 2.11
TRPM4Q8TD43 MIR939-201ENST00000401314 82 ntBASIC28.2■■■□□ 2.1
TRPM4Q8TD43 PARL-206ENST00000435888 1098 ntTSL 5 BASIC28.2■■■□□ 2.1
TRPM4Q8TD43 MIR6821-201ENST00000617625 74 ntBASIC28.2■■■□□ 2.1
TRPM4Q8TD43 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC28.2■■■□□ 2.1
TRPM4Q8TD43 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC28.2■■■□□ 2.1
TRPM4Q8TD43 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
TRPM4Q8TD43 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
TRPM4Q8TD43 AP001330.3-201ENST00000520123 633 ntBASIC28.19■■■□□ 2.1
TRPM4Q8TD43 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC28.19■■■□□ 2.1
TRPM4Q8TD43 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC28.19■■■□□ 2.1
TRPM4Q8TD43 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
TRPM4Q8TD43 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
TRPM4Q8TD43 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
TRPM4Q8TD43 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
TRPM4Q8TD43 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC28.18■■■□□ 2.1
TRPM4Q8TD43 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC28.18■■■□□ 2.1
TRPM4Q8TD43 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
TRPM4Q8TD43 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
TRPM4Q8TD43 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC28.17■■■□□ 2.1
TRPM4Q8TD43 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
TRPM4Q8TD43 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
TRPM4Q8TD43 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC28.17■■■□□ 2.1
TRPM4Q8TD43 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC28.17■■■□□ 2.1
TRPM4Q8TD43 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
TRPM4Q8TD43 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC28.17■■■□□ 2.1
TRPM4Q8TD43 GATM-206ENST00000558336 1522 ntTSL 2 BASIC28.17■■■□□ 2.1
TRPM4Q8TD43 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
TRPM4Q8TD43 RBM38-205ENST00000440234 686 ntTSL 2 BASIC28.16■■■□□ 2.1
TRPM4Q8TD43 AC087623.3-201ENST00000607047 1098 ntBASIC28.16■■■□□ 2.1
TRPM4Q8TD43 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC28.16■■■□□ 2.1
TRPM4Q8TD43 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
TRPM4Q8TD43 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
TRPM4Q8TD43 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
TRPM4Q8TD43 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
TRPM4Q8TD43 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC28.15■■■□□ 2.1
TRPM4Q8TD43 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
TRPM4Q8TD43 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC28.14■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms