Protein–RNA interactions for Protein: Q8NHU3

SGMS2, Phosphatidylcholine:ceramide cholinephosphotransferase 2, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS2Q8NHU3 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SGMS2Q8NHU3 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SGMS2Q8NHU3 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SGMS2Q8NHU3 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SGMS2Q8NHU3 AC019171.1-201ENST00000601251 1056 ntBASIC19.2■□□□□ 0.66
SGMS2Q8NHU3 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
SGMS2Q8NHU3 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SGMS2Q8NHU3 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
SGMS2Q8NHU3 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SGMS2Q8NHU3 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SGMS2Q8NHU3 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SGMS2Q8NHU3 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
SGMS2Q8NHU3 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.19■□□□□ 0.66
SGMS2Q8NHU3 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SGMS2Q8NHU3 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC19.18■□□□□ 0.66
SGMS2Q8NHU3 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC19.18■□□□□ 0.66
SGMS2Q8NHU3 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SGMS2Q8NHU3 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.18■□□□□ 0.66
SGMS2Q8NHU3 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SGMS2Q8NHU3 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SGMS2Q8NHU3 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SGMS2Q8NHU3 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SGMS2Q8NHU3 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.17■□□□□ 0.66
SGMS2Q8NHU3 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SGMS2Q8NHU3 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.17■□□□□ 0.66
SGMS2Q8NHU3 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.17■□□□□ 0.66
SGMS2Q8NHU3 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC19.17■□□□□ 0.66
SGMS2Q8NHU3 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
SGMS2Q8NHU3 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SGMS2Q8NHU3 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SGMS2Q8NHU3 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SGMS2Q8NHU3 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.16■□□□□ 0.66
SGMS2Q8NHU3 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SGMS2Q8NHU3 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SGMS2Q8NHU3 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.16■□□□□ 0.66
SGMS2Q8NHU3 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.16■□□□□ 0.66
SGMS2Q8NHU3 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
SGMS2Q8NHU3 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.16■□□□□ 0.66
SGMS2Q8NHU3 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SGMS2Q8NHU3 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SGMS2Q8NHU3 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SGMS2Q8NHU3 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SGMS2Q8NHU3 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SGMS2Q8NHU3 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.15■□□□□ 0.66
SGMS2Q8NHU3 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SGMS2Q8NHU3 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.15■□□□□ 0.66
SGMS2Q8NHU3 LONRF2P2-201ENST00000439212 571 ntBASIC19.15■□□□□ 0.66
SGMS2Q8NHU3 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.15■□□□□ 0.66
SGMS2Q8NHU3 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SGMS2Q8NHU3 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.15■□□□□ 0.66
SGMS2Q8NHU3 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC19.15■□□□□ 0.66
SGMS2Q8NHU3 AC092803.2-201ENST00000564287 1899 ntBASIC19.15■□□□□ 0.66
SGMS2Q8NHU3 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SGMS2Q8NHU3 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.14■□□□□ 0.65
SGMS2Q8NHU3 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SGMS2Q8NHU3 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC19.14■□□□□ 0.65
SGMS2Q8NHU3 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SGMS2Q8NHU3 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC19.14■□□□□ 0.65
SGMS2Q8NHU3 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SGMS2Q8NHU3 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SGMS2Q8NHU3 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC19.13■□□□□ 0.65
SGMS2Q8NHU3 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
SGMS2Q8NHU3 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.13■□□□□ 0.65
SGMS2Q8NHU3 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SGMS2Q8NHU3 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.13■□□□□ 0.65
SGMS2Q8NHU3 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SGMS2Q8NHU3 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.13■□□□□ 0.65
SGMS2Q8NHU3 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SGMS2Q8NHU3 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
SGMS2Q8NHU3 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.12■□□□□ 0.65
SGMS2Q8NHU3 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
SGMS2Q8NHU3 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SGMS2Q8NHU3 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SGMS2Q8NHU3 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.12■□□□□ 0.65
SGMS2Q8NHU3 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.12■□□□□ 0.65
SGMS2Q8NHU3 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SGMS2Q8NHU3 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
SGMS2Q8NHU3 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
SGMS2Q8NHU3 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SGMS2Q8NHU3 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SGMS2Q8NHU3 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SGMS2Q8NHU3 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SGMS2Q8NHU3 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SGMS2Q8NHU3 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SGMS2Q8NHU3 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.11■□□□□ 0.65
SGMS2Q8NHU3 BX664725.1-201ENST00000438252 379 ntBASIC19.11■□□□□ 0.65
SGMS2Q8NHU3 KRT16P3-201ENST00000439127 1283 ntBASIC19.11■□□□□ 0.65
SGMS2Q8NHU3 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.11■□□□□ 0.65
SGMS2Q8NHU3 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.11■□□□□ 0.65
SGMS2Q8NHU3 MIR4787-201ENST00000607364 84 ntBASIC19.11■□□□□ 0.65
SGMS2Q8NHU3 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SGMS2Q8NHU3 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SGMS2Q8NHU3 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SGMS2Q8NHU3 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SGMS2Q8NHU3 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SGMS2Q8NHU3 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SGMS2Q8NHU3 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SGMS2Q8NHU3 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.1■□□□□ 0.65
SGMS2Q8NHU3 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SGMS2Q8NHU3 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms