Protein–RNA interactions for Protein: Q8NEM2

SHCBP1, SHC SH2 domain-binding protein 1, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1Q8NEM2 TFPT-201ENST00000391757 774 ntTSL 5 BASIC26.96■■□□□ 1.91
SHCBP1Q8NEM2 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC26.96■■□□□ 1.91
SHCBP1Q8NEM2 AC096631.2-201ENST00000436136 790 ntBASIC26.96■■□□□ 1.91
SHCBP1Q8NEM2 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
SHCBP1Q8NEM2 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
SHCBP1Q8NEM2 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC26.96■■□□□ 1.91
SHCBP1Q8NEM2 AC090877.2-201ENST00000558441 1738 ntBASIC26.96■■□□□ 1.91
SHCBP1Q8NEM2 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
SHCBP1Q8NEM2 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
SHCBP1Q8NEM2 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC26.95■■□□□ 1.9
SHCBP1Q8NEM2 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC26.95■■□□□ 1.9
SHCBP1Q8NEM2 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC26.95■■□□□ 1.9
SHCBP1Q8NEM2 MIR6722-201ENST00000617286 78 ntBASIC26.95■■□□□ 1.9
SHCBP1Q8NEM2 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC26.95■■□□□ 1.9
SHCBP1Q8NEM2 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
SHCBP1Q8NEM2 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC26.94■■□□□ 1.9
SHCBP1Q8NEM2 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
SHCBP1Q8NEM2 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
SHCBP1Q8NEM2 AC133561.4-201ENST00000566112 224 ntBASIC26.94■■□□□ 1.9
SHCBP1Q8NEM2 SNX5-217ENST00000606557 1087 ntBASIC26.94■■□□□ 1.9
SHCBP1Q8NEM2 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
SHCBP1Q8NEM2 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC26.93■■□□□ 1.9
SHCBP1Q8NEM2 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
SHCBP1Q8NEM2 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
SHCBP1Q8NEM2 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC26.93■■□□□ 1.9
SHCBP1Q8NEM2 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC26.93■■□□□ 1.9
SHCBP1Q8NEM2 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC26.93■■□□□ 1.9
SHCBP1Q8NEM2 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC26.93■■□□□ 1.9
SHCBP1Q8NEM2 RASSF1-AS1-201ENST00000629828 790 ntBASIC26.93■■□□□ 1.9
SHCBP1Q8NEM2 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
SHCBP1Q8NEM2 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC26.92■■□□□ 1.9
SHCBP1Q8NEM2 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
SHCBP1Q8NEM2 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC26.92■■□□□ 1.9
SHCBP1Q8NEM2 AC005837.3-201ENST00000612163 286 ntBASIC26.92■■□□□ 1.9
SHCBP1Q8NEM2 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
SHCBP1Q8NEM2 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC26.92■■□□□ 1.9
SHCBP1Q8NEM2 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
SHCBP1Q8NEM2 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
SHCBP1Q8NEM2 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC26.91■■□□□ 1.9
SHCBP1Q8NEM2 CLTA-206ENST00000466396 695 ntTSL 2 BASIC26.91■■□□□ 1.9
SHCBP1Q8NEM2 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC26.91■■□□□ 1.9
SHCBP1Q8NEM2 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
SHCBP1Q8NEM2 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC26.9■■□□□ 1.9
SHCBP1Q8NEM2 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC26.9■■□□□ 1.9
SHCBP1Q8NEM2 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC26.89■■□□□ 1.9
SHCBP1Q8NEM2 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC26.89■■□□□ 1.9
SHCBP1Q8NEM2 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
SHCBP1Q8NEM2 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC26.89■■□□□ 1.9
SHCBP1Q8NEM2 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
SHCBP1Q8NEM2 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
SHCBP1Q8NEM2 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
SHCBP1Q8NEM2 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
SHCBP1Q8NEM2 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC26.89■■□□□ 1.89
SHCBP1Q8NEM2 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC26.88■■□□□ 1.89
SHCBP1Q8NEM2 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
SHCBP1Q8NEM2 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
SHCBP1Q8NEM2 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC26.88■■□□□ 1.89
SHCBP1Q8NEM2 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
SHCBP1Q8NEM2 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
SHCBP1Q8NEM2 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC26.87■■□□□ 1.89
SHCBP1Q8NEM2 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
SHCBP1Q8NEM2 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
SHCBP1Q8NEM2 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC26.87■■□□□ 1.89
SHCBP1Q8NEM2 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
SHCBP1Q8NEM2 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
SHCBP1Q8NEM2 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
SHCBP1Q8NEM2 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
SHCBP1Q8NEM2 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC26.86■■□□□ 1.89
SHCBP1Q8NEM2 AC097639.1-201ENST00000565519 1891 ntBASIC26.85■■□□□ 1.89
SHCBP1Q8NEM2 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC26.85■■□□□ 1.89
SHCBP1Q8NEM2 LBH-205ENST00000407930 756 ntTSL 2 BASIC26.85■■□□□ 1.89
SHCBP1Q8NEM2 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC26.85■■□□□ 1.89
SHCBP1Q8NEM2 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC26.85■■□□□ 1.89
SHCBP1Q8NEM2 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC26.85■■□□□ 1.89
SHCBP1Q8NEM2 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC26.85■■□□□ 1.89
SHCBP1Q8NEM2 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
SHCBP1Q8NEM2 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
SHCBP1Q8NEM2 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC26.85■■□□□ 1.89
SHCBP1Q8NEM2 AC096887.2-201ENST00000623443 1957 ntBASIC26.84■■□□□ 1.89
SHCBP1Q8NEM2 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
SHCBP1Q8NEM2 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC26.83■■□□□ 1.89
SHCBP1Q8NEM2 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
SHCBP1Q8NEM2 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC26.82■■□□□ 1.88
SHCBP1Q8NEM2 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC26.82■■□□□ 1.88
SHCBP1Q8NEM2 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC26.82■■□□□ 1.88
SHCBP1Q8NEM2 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
SHCBP1Q8NEM2 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC26.82■■□□□ 1.88
SHCBP1Q8NEM2 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
SHCBP1Q8NEM2 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
SHCBP1Q8NEM2 SHF-206ENST00000560471 2499 ntTSL 5 BASIC26.81■■□□□ 1.88
SHCBP1Q8NEM2 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
SHCBP1Q8NEM2 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
SHCBP1Q8NEM2 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
SHCBP1Q8NEM2 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
SHCBP1Q8NEM2 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC26.8■■□□□ 1.88
SHCBP1Q8NEM2 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
SHCBP1Q8NEM2 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC26.8■■□□□ 1.88
SHCBP1Q8NEM2 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC26.8■■□□□ 1.88
SHCBP1Q8NEM2 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC26.8■■□□□ 1.88
SHCBP1Q8NEM2 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms