Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 AC120024.1-201ENST00000562672 995 ntBASIC23.95■■□□□ 1.42
PCDH20Q8N6Y1 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC23.95■■□□□ 1.42
PCDH20Q8N6Y1 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.42
PCDH20Q8N6Y1 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
PCDH20Q8N6Y1 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
PCDH20Q8N6Y1 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PCDH20Q8N6Y1 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC23.94■■□□□ 1.42
PCDH20Q8N6Y1 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PCDH20Q8N6Y1 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC23.94■■□□□ 1.42
PCDH20Q8N6Y1 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
PCDH20Q8N6Y1 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PCDH20Q8N6Y1 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC23.93■■□□□ 1.42
PCDH20Q8N6Y1 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC23.93■■□□□ 1.42
PCDH20Q8N6Y1 SSSCA1-AS1-201ENST00000567594 614 ntBASIC23.93■■□□□ 1.42
PCDH20Q8N6Y1 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
PCDH20Q8N6Y1 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC23.92■■□□□ 1.42
PCDH20Q8N6Y1 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PCDH20Q8N6Y1 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
PCDH20Q8N6Y1 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PCDH20Q8N6Y1 AC011551.1-201ENST00000614101 683 ntBASIC23.92■■□□□ 1.42
PCDH20Q8N6Y1 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PCDH20Q8N6Y1 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PCDH20Q8N6Y1 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PCDH20Q8N6Y1 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PCDH20Q8N6Y1 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PCDH20Q8N6Y1 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PCDH20Q8N6Y1 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
PCDH20Q8N6Y1 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
PCDH20Q8N6Y1 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
PCDH20Q8N6Y1 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
PCDH20Q8N6Y1 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PCDH20Q8N6Y1 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
PCDH20Q8N6Y1 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC23.9■■□□□ 1.42
PCDH20Q8N6Y1 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC23.9■■□□□ 1.42
PCDH20Q8N6Y1 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PCDH20Q8N6Y1 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC23.9■■□□□ 1.42
PCDH20Q8N6Y1 TRIR-205ENST00000592273 783 ntTSL 3 BASIC23.9■■□□□ 1.42
PCDH20Q8N6Y1 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
PCDH20Q8N6Y1 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.42
PCDH20Q8N6Y1 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
PCDH20Q8N6Y1 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
PCDH20Q8N6Y1 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
PCDH20Q8N6Y1 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
PCDH20Q8N6Y1 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
PCDH20Q8N6Y1 RNF146-205ENST00000477776 762 ntTSL 3 BASIC23.89■■□□□ 1.41
PCDH20Q8N6Y1 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
PCDH20Q8N6Y1 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.41
PCDH20Q8N6Y1 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
PCDH20Q8N6Y1 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
PCDH20Q8N6Y1 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC23.88■■□□□ 1.41
PCDH20Q8N6Y1 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PCDH20Q8N6Y1 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
PCDH20Q8N6Y1 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PCDH20Q8N6Y1 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PCDH20Q8N6Y1 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PCDH20Q8N6Y1 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
PCDH20Q8N6Y1 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC23.87■■□□□ 1.41
PCDH20Q8N6Y1 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC23.87■■□□□ 1.41
PCDH20Q8N6Y1 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
PCDH20Q8N6Y1 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.87■■□□□ 1.41
PCDH20Q8N6Y1 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC23.87■■□□□ 1.41
PCDH20Q8N6Y1 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
PCDH20Q8N6Y1 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
PCDH20Q8N6Y1 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PCDH20Q8N6Y1 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PCDH20Q8N6Y1 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC23.86■■□□□ 1.41
PCDH20Q8N6Y1 Z92544.1-202ENST00000571933 1220 ntBASIC23.86■■□□□ 1.41
PCDH20Q8N6Y1 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDH20Q8N6Y1 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDH20Q8N6Y1 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC23.85■■□□□ 1.41
PCDH20Q8N6Y1 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC23.85■■□□□ 1.41
PCDH20Q8N6Y1 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC23.85■■□□□ 1.41
PCDH20Q8N6Y1 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDH20Q8N6Y1 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDH20Q8N6Y1 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDH20Q8N6Y1 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PCDH20Q8N6Y1 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
PCDH20Q8N6Y1 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PCDH20Q8N6Y1 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
PCDH20Q8N6Y1 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PCDH20Q8N6Y1 HES6-204ENST00000409182 863 ntTSL 2 BASIC23.84■■□□□ 1.41
PCDH20Q8N6Y1 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC23.84■■□□□ 1.41
PCDH20Q8N6Y1 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC23.84■■□□□ 1.41
PCDH20Q8N6Y1 MIR4281-201ENST00000580852 62 ntBASIC23.84■■□□□ 1.41
PCDH20Q8N6Y1 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PCDH20Q8N6Y1 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PCDH20Q8N6Y1 GAK-223ENST00000628912 497 ntTSL 5 BASIC23.84■■□□□ 1.41
PCDH20Q8N6Y1 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC23.84■■□□□ 1.41
PCDH20Q8N6Y1 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
PCDH20Q8N6Y1 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PCDH20Q8N6Y1 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PCDH20Q8N6Y1 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC23.83■■□□□ 1.41
PCDH20Q8N6Y1 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
PCDH20Q8N6Y1 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDH20Q8N6Y1 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
PCDH20Q8N6Y1 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC23.82■■□□□ 1.4
PCDH20Q8N6Y1 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
PCDH20Q8N6Y1 BX664725.1-201ENST00000438252 379 ntBASIC23.82■■□□□ 1.4
PCDH20Q8N6Y1 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PCDH20Q8N6Y1 AC137630.3-201ENST00000607245 391 ntBASIC23.82■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms