Protein–RNA interactions for Protein: Q8IXL7

MSRB3, Methionine-R-sulfoxide reductase B3, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3Q8IXL7 SRP68-213ENST00000629930 165 ntTSL 5 BASIC22.16■■□□□ 1.14
MSRB3Q8IXL7 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC22.16■■□□□ 1.14
MSRB3Q8IXL7 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
MSRB3Q8IXL7 ABCB10P4-201ENST00000566803 2184 ntBASIC22.15■■□□□ 1.14
MSRB3Q8IXL7 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
MSRB3Q8IXL7 REST-210ENST00000638187 1334 ntTSL 5 BASIC22.15■■□□□ 1.14
MSRB3Q8IXL7 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
MSRB3Q8IXL7 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
MSRB3Q8IXL7 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
MSRB3Q8IXL7 TPT1-202ENST00000379055 948 ntTSL 2 BASIC22.15■■□□□ 1.14
MSRB3Q8IXL7 AC093536.1-201ENST00000569153 554 ntBASIC22.15■■□□□ 1.14
MSRB3Q8IXL7 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
MSRB3Q8IXL7 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC22.15■■□□□ 1.14
MSRB3Q8IXL7 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC22.15■■□□□ 1.14
MSRB3Q8IXL7 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
MSRB3Q8IXL7 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
MSRB3Q8IXL7 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
MSRB3Q8IXL7 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
MSRB3Q8IXL7 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
MSRB3Q8IXL7 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
MSRB3Q8IXL7 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC22.14■■□□□ 1.14
MSRB3Q8IXL7 MIR639-201ENST00000384974 98 ntBASIC22.14■■□□□ 1.13
MSRB3Q8IXL7 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
MSRB3Q8IXL7 MIR7108-201ENST00000614319 87 ntBASIC22.14■■□□□ 1.13
MSRB3Q8IXL7 HLA-L-211ENST00000482052 1765 ntBASIC22.14■■□□□ 1.13
MSRB3Q8IXL7 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
MSRB3Q8IXL7 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
MSRB3Q8IXL7 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
MSRB3Q8IXL7 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
MSRB3Q8IXL7 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC22.13■■□□□ 1.13
MSRB3Q8IXL7 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC22.13■■□□□ 1.13
MSRB3Q8IXL7 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
MSRB3Q8IXL7 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
MSRB3Q8IXL7 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
MSRB3Q8IXL7 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
MSRB3Q8IXL7 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
MSRB3Q8IXL7 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
MSRB3Q8IXL7 AC068473.5-201ENST00000616428 2072 ntBASIC22.12■■□□□ 1.13
MSRB3Q8IXL7 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC22.12■■□□□ 1.13
MSRB3Q8IXL7 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC22.12■■□□□ 1.13
MSRB3Q8IXL7 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
MSRB3Q8IXL7 SHD-204ENST00000599689 1729 ntTSL 5 BASIC22.11■■□□□ 1.13
MSRB3Q8IXL7 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC22.11■■□□□ 1.13
MSRB3Q8IXL7 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
MSRB3Q8IXL7 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
MSRB3Q8IXL7 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
MSRB3Q8IXL7 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC22.11■■□□□ 1.13
MSRB3Q8IXL7 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC22.11■■□□□ 1.13
MSRB3Q8IXL7 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
MSRB3Q8IXL7 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.11■■□□□ 1.13
MSRB3Q8IXL7 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC22.11■■□□□ 1.13
MSRB3Q8IXL7 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC22.11■■□□□ 1.13
MSRB3Q8IXL7 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
MSRB3Q8IXL7 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
MSRB3Q8IXL7 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
MSRB3Q8IXL7 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
MSRB3Q8IXL7 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC22.1■■□□□ 1.13
MSRB3Q8IXL7 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
MSRB3Q8IXL7 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC22.1■■□□□ 1.13
MSRB3Q8IXL7 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
MSRB3Q8IXL7 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
MSRB3Q8IXL7 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
MSRB3Q8IXL7 AC022413.1-201ENST00000624602 984 ntBASIC22.1■■□□□ 1.13
MSRB3Q8IXL7 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
MSRB3Q8IXL7 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC22.1■■□□□ 1.13
MSRB3Q8IXL7 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC22.09■■□□□ 1.13
MSRB3Q8IXL7 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
MSRB3Q8IXL7 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
MSRB3Q8IXL7 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
MSRB3Q8IXL7 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
MSRB3Q8IXL7 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
MSRB3Q8IXL7 AC007029.1-201ENST00000604183 313 ntBASIC22.09■■□□□ 1.13
MSRB3Q8IXL7 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
MSRB3Q8IXL7 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC22.09■■□□□ 1.13
MSRB3Q8IXL7 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
MSRB3Q8IXL7 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC22.09■■□□□ 1.13
MSRB3Q8IXL7 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC22.08■■□□□ 1.13
MSRB3Q8IXL7 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
MSRB3Q8IXL7 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC22.08■■□□□ 1.13
MSRB3Q8IXL7 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
MSRB3Q8IXL7 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
MSRB3Q8IXL7 RAP2CP1-202ENST00000605179 643 ntBASIC22.08■■□□□ 1.13
MSRB3Q8IXL7 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
MSRB3Q8IXL7 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
MSRB3Q8IXL7 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.12
MSRB3Q8IXL7 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
MSRB3Q8IXL7 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
MSRB3Q8IXL7 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
MSRB3Q8IXL7 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
MSRB3Q8IXL7 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
MSRB3Q8IXL7 AC012676.1-201ENST00000574705 1949 ntBASIC22.07■■□□□ 1.12
MSRB3Q8IXL7 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC22.06■■□□□ 1.12
MSRB3Q8IXL7 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
MSRB3Q8IXL7 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
MSRB3Q8IXL7 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
MSRB3Q8IXL7 PVT1-219ENST00000523427 938 ntTSL 3 BASIC22.06■■□□□ 1.12
MSRB3Q8IXL7 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC22.06■■□□□ 1.12
MSRB3Q8IXL7 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
MSRB3Q8IXL7 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
MSRB3Q8IXL7 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms