Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC34.12■■■■□ 3.05
UBR1Q8IWV7 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC34.11■■■■□ 3.05
UBR1Q8IWV7 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC34.11■■■■□ 3.05
UBR1Q8IWV7 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC34.1■■■■□ 3.05
UBR1Q8IWV7 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC34.1■■■■□ 3.05
UBR1Q8IWV7 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC34.1■■■■□ 3.05
UBR1Q8IWV7 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC34.1■■■■□ 3.05
UBR1Q8IWV7 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC34.1■■■■□ 3.05
UBR1Q8IWV7 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC34.1■■■■□ 3.05
UBR1Q8IWV7 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC34.09■■■■□ 3.05
UBR1Q8IWV7 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC34.09■■■■□ 3.05
UBR1Q8IWV7 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC34.09■■■■□ 3.05
UBR1Q8IWV7 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC34.09■■■■□ 3.05
UBR1Q8IWV7 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC34.09■■■■□ 3.05
UBR1Q8IWV7 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC34.09■■■■□ 3.05
UBR1Q8IWV7 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC34.09■■■■□ 3.05
UBR1Q8IWV7 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC34.09■■■■□ 3.05
UBR1Q8IWV7 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC34.09■■■■□ 3.05
UBR1Q8IWV7 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC34.09■■■■□ 3.05
UBR1Q8IWV7 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC34.08■■■■□ 3.05
UBR1Q8IWV7 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC34.08■■■■□ 3.05
UBR1Q8IWV7 MIR6821-201ENST00000617625 74 ntBASIC34.08■■■■□ 3.05
UBR1Q8IWV7 AL355001.2-201ENST00000620617 1191 ntBASIC34.08■■■■□ 3.05
UBR1Q8IWV7 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC34.08■■■■□ 3.05
UBR1Q8IWV7 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC34.08■■■■□ 3.05
UBR1Q8IWV7 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC34.08■■■■□ 3.05
UBR1Q8IWV7 AP004609.3-201ENST00000610705 1884 ntBASIC34.08■■■■□ 3.05
UBR1Q8IWV7 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC34.07■■■■□ 3.04
UBR1Q8IWV7 AL136967.2-201ENST00000623968 743 ntBASIC34.06■■■■□ 3.04
UBR1Q8IWV7 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC34.06■■■■□ 3.04
UBR1Q8IWV7 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC34.05■■■■□ 3.04
UBR1Q8IWV7 GRAMD4P4-201ENST00000613563 1115 ntBASIC34.05■■■■□ 3.04
UBR1Q8IWV7 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC34.05■■■■□ 3.04
UBR1Q8IWV7 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC34.05■■■■□ 3.04
UBR1Q8IWV7 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC34.04■■■■□ 3.04
UBR1Q8IWV7 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC34.04■■■■□ 3.04
UBR1Q8IWV7 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC34.04■■■■□ 3.04
UBR1Q8IWV7 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC34.04■■■■□ 3.04
UBR1Q8IWV7 SF1-220ENST00000626028 704 ntTSL 2 BASIC34.04■■■■□ 3.04
UBR1Q8IWV7 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC34.04■■■■□ 3.04
UBR1Q8IWV7 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC34.03■■■■□ 3.04
UBR1Q8IWV7 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC34.03■■■■□ 3.04
UBR1Q8IWV7 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC34.03■■■■□ 3.04
UBR1Q8IWV7 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC34.03■■■■□ 3.04
UBR1Q8IWV7 AC097381.1-201ENST00000429019 1296 ntBASIC34.03■■■■□ 3.04
UBR1Q8IWV7 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC34.03■■■■□ 3.04
UBR1Q8IWV7 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC34.02■■■■□ 3.04
UBR1Q8IWV7 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC34.02■■■■□ 3.04
UBR1Q8IWV7 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC34.02■■■■□ 3.04
UBR1Q8IWV7 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC34.02■■■■□ 3.04
UBR1Q8IWV7 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC34.02■■■■□ 3.04
UBR1Q8IWV7 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC34.01■■■■□ 3.04
UBR1Q8IWV7 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC34.01■■■■□ 3.04
UBR1Q8IWV7 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC34.01■■■■□ 3.03
UBR1Q8IWV7 SRD5A1P1-201ENST00000442297 786 ntBASIC34.01■■■■□ 3.03
UBR1Q8IWV7 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC34.01■■■■□ 3.03
UBR1Q8IWV7 GATM-206ENST00000558336 1522 ntTSL 2 BASIC34.01■■■■□ 3.03
UBR1Q8IWV7 FOXO3B-201ENST00000395675 1928 ntBASIC34■■■■□ 3.03
UBR1Q8IWV7 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC34■■■■□ 3.03
UBR1Q8IWV7 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC34■■■■□ 3.03
UBR1Q8IWV7 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC33.99■■■■□ 3.03
UBR1Q8IWV7 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC33.99■■■■□ 3.03
UBR1Q8IWV7 HYI-206ENST00000372434 1025 ntTSL 5 BASIC33.99■■■■□ 3.03
UBR1Q8IWV7 AC087623.3-201ENST00000607047 1098 ntBASIC33.99■■■■□ 3.03
UBR1Q8IWV7 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC33.98■■■■□ 3.03
UBR1Q8IWV7 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC33.98■■■■□ 3.03
UBR1Q8IWV7 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC33.98■■■■□ 3.03
UBR1Q8IWV7 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC33.98■■■■□ 3.03
UBR1Q8IWV7 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC33.97■■■■□ 3.03
UBR1Q8IWV7 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC33.97■■■■□ 3.03
UBR1Q8IWV7 AL162430.1-201ENST00000480705 870 ntBASIC33.96■■■■□ 3.03
UBR1Q8IWV7 PLD4-205ENST00000553861 667 ntTSL 2 BASIC33.96■■■■□ 3.03
UBR1Q8IWV7 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC33.96■■■■□ 3.03
UBR1Q8IWV7 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC33.96■■■■□ 3.03
UBR1Q8IWV7 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC33.96■■■■□ 3.03
UBR1Q8IWV7 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC33.96■■■■□ 3.03
UBR1Q8IWV7 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC33.96■■■■□ 3.03
UBR1Q8IWV7 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC33.96■■■■□ 3.03
UBR1Q8IWV7 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC33.96■■■■□ 3.03
UBR1Q8IWV7 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC33.95■■■■□ 3.03
UBR1Q8IWV7 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC33.95■■■■□ 3.03
UBR1Q8IWV7 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC33.95■■■■□ 3.03
UBR1Q8IWV7 PTMA-205ENST00000410064 814 ntTSL 2 BASIC33.95■■■■□ 3.03
UBR1Q8IWV7 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC33.94■■■■□ 3.02
UBR1Q8IWV7 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC33.94■■■■□ 3.02
UBR1Q8IWV7 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC33.94■■■■□ 3.02
UBR1Q8IWV7 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC33.94■■■■□ 3.02
UBR1Q8IWV7 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC33.94■■■■□ 3.02
UBR1Q8IWV7 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC33.94■■■■□ 3.02
UBR1Q8IWV7 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC33.93■■■■□ 3.02
UBR1Q8IWV7 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC33.93■■■■□ 3.02
UBR1Q8IWV7 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC33.92■■■■□ 3.02
UBR1Q8IWV7 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC33.92■■■■□ 3.02
UBR1Q8IWV7 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC33.92■■■■□ 3.02
UBR1Q8IWV7 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC33.91■■■■□ 3.02
UBR1Q8IWV7 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC33.91■■■■□ 3.02
UBR1Q8IWV7 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC33.91■■■■□ 3.02
UBR1Q8IWV7 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC33.91■■■■□ 3.02
UBR1Q8IWV7 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC33.91■■■■□ 3.02
UBR1Q8IWV7 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC33.91■■■■□ 3.02
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms