Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC30.06■■■□□ 2.4
COL23A1Q86Y22 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC30.06■■■□□ 2.4
COL23A1Q86Y22 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
COL23A1Q86Y22 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
COL23A1Q86Y22 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
COL23A1Q86Y22 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
COL23A1Q86Y22 AP001330.3-201ENST00000520123 633 ntBASIC30.05■■■□□ 2.4
COL23A1Q86Y22 ABCB10P1-201ENST00000614297 2181 ntBASIC30.05■■■□□ 2.4
COL23A1Q86Y22 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
COL23A1Q86Y22 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC30.04■■■□□ 2.4
COL23A1Q86Y22 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC30.04■■■□□ 2.4
COL23A1Q86Y22 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC30.04■■■□□ 2.4
COL23A1Q86Y22 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC30.03■■■□□ 2.4
COL23A1Q86Y22 PLD4-205ENST00000553861 667 ntTSL 2 BASIC30.03■■■□□ 2.4
COL23A1Q86Y22 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC30.03■■■□□ 2.4
COL23A1Q86Y22 DRD5P2-201ENST00000421395 2012 ntBASIC30.03■■■□□ 2.4
COL23A1Q86Y22 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC30.02■■■□□ 2.4
COL23A1Q86Y22 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
COL23A1Q86Y22 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
COL23A1Q86Y22 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
COL23A1Q86Y22 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC30.02■■■□□ 2.4
COL23A1Q86Y22 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
COL23A1Q86Y22 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC30.01■■■□□ 2.39
COL23A1Q86Y22 SNAI3-AS1-204ENST00000567997 2048 ntBASIC30.01■■■□□ 2.39
COL23A1Q86Y22 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC30■■■□□ 2.39
COL23A1Q86Y22 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
COL23A1Q86Y22 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC30■■■□□ 2.39
COL23A1Q86Y22 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC30■■■□□ 2.39
COL23A1Q86Y22 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC30■■■□□ 2.39
COL23A1Q86Y22 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC30■■■□□ 2.39
COL23A1Q86Y22 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
COL23A1Q86Y22 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
COL23A1Q86Y22 GATM-206ENST00000558336 1522 ntTSL 2 BASIC29.99■■■□□ 2.39
COL23A1Q86Y22 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC29.98■■■□□ 2.39
COL23A1Q86Y22 LINC01003-201ENST00000564834 1764 ntBASIC29.98■■■□□ 2.39
COL23A1Q86Y22 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
COL23A1Q86Y22 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
COL23A1Q86Y22 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC29.97■■■□□ 2.39
COL23A1Q86Y22 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC29.96■■■□□ 2.39
COL23A1Q86Y22 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC29.96■■■□□ 2.39
COL23A1Q86Y22 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC29.96■■■□□ 2.39
COL23A1Q86Y22 AC091305.1-201ENST00000479476 895 ntBASIC29.96■■■□□ 2.39
COL23A1Q86Y22 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
COL23A1Q86Y22 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
COL23A1Q86Y22 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
COL23A1Q86Y22 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC29.95■■■□□ 2.39
COL23A1Q86Y22 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
COL23A1Q86Y22 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
COL23A1Q86Y22 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC29.95■■■□□ 2.38
COL23A1Q86Y22 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
COL23A1Q86Y22 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC29.94■■■□□ 2.38
COL23A1Q86Y22 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
COL23A1Q86Y22 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
COL23A1Q86Y22 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
COL23A1Q86Y22 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC29.93■■■□□ 2.38
COL23A1Q86Y22 MAG-206ENST00000597035 542 ntTSL 4 BASIC29.93■■■□□ 2.38
COL23A1Q86Y22 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
COL23A1Q86Y22 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
COL23A1Q86Y22 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
COL23A1Q86Y22 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC29.92■■■□□ 2.38
COL23A1Q86Y22 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
COL23A1Q86Y22 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
COL23A1Q86Y22 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC29.92■■■□□ 2.38
COL23A1Q86Y22 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
COL23A1Q86Y22 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC29.91■■■□□ 2.38
COL23A1Q86Y22 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC29.91■■■□□ 2.38
COL23A1Q86Y22 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
COL23A1Q86Y22 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC29.9■■■□□ 2.38
COL23A1Q86Y22 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC29.9■■■□□ 2.38
COL23A1Q86Y22 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC29.89■■■□□ 2.38
COL23A1Q86Y22 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
COL23A1Q86Y22 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC29.89■■■□□ 2.38
COL23A1Q86Y22 CA15P2-201ENST00000611168 834 ntBASIC29.89■■■□□ 2.38
COL23A1Q86Y22 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
COL23A1Q86Y22 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
COL23A1Q86Y22 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC29.88■■■□□ 2.37
COL23A1Q86Y22 MIR4767-201ENST00000582827 78 ntBASIC29.88■■■□□ 2.37
COL23A1Q86Y22 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
COL23A1Q86Y22 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC29.87■■■□□ 2.37
COL23A1Q86Y22 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC29.87■■■□□ 2.37
COL23A1Q86Y22 AC004448.1-201ENST00000458332 883 ntBASIC29.87■■■□□ 2.37
COL23A1Q86Y22 AC090192.1-201ENST00000517740 490 ntBASIC29.87■■■□□ 2.37
COL23A1Q86Y22 DUX4L19-201ENST00000557448 1267 ntBASIC29.87■■■□□ 2.37
COL23A1Q86Y22 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC29.87■■■□□ 2.37
COL23A1Q86Y22 SF1-220ENST00000626028 704 ntTSL 2 BASIC29.87■■■□□ 2.37
COL23A1Q86Y22 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC29.87■■■□□ 2.37
COL23A1Q86Y22 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC29.87■■■□□ 2.37
COL23A1Q86Y22 AP004609.3-201ENST00000610705 1884 ntBASIC29.87■■■□□ 2.37
COL23A1Q86Y22 FOXO3B-201ENST00000395675 1928 ntBASIC29.86■■■□□ 2.37
COL23A1Q86Y22 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
COL23A1Q86Y22 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC29.86■■■□□ 2.37
COL23A1Q86Y22 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
COL23A1Q86Y22 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
COL23A1Q86Y22 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
COL23A1Q86Y22 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
COL23A1Q86Y22 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC29.85■■■□□ 2.37
COL23A1Q86Y22 RARRES2P11-201ENST00000635158 484 ntBASIC29.85■■■□□ 2.37
COL23A1Q86Y22 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC29.85■■■□□ 2.37
COL23A1Q86Y22 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC29.85■■■□□ 2.37
COL23A1Q86Y22 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC29.84■■■□□ 2.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms