Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.75■□□□□ 0.91
LRRC28Q86X40 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.75■□□□□ 0.91
LRRC28Q86X40 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LRRC28Q86X40 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRRC28Q86X40 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.75■□□□□ 0.91
LRRC28Q86X40 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRRC28Q86X40 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRRC28Q86X40 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRRC28Q86X40 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRRC28Q86X40 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRRC28Q86X40 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LRRC28Q86X40 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRRC28Q86X40 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRRC28Q86X40 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRRC28Q86X40 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LRRC28Q86X40 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
LRRC28Q86X40 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRRC28Q86X40 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.73■□□□□ 0.91
LRRC28Q86X40 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
LRRC28Q86X40 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LRRC28Q86X40 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
LRRC28Q86X40 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
LRRC28Q86X40 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
LRRC28Q86X40 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
LRRC28Q86X40 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LRRC28Q86X40 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRRC28Q86X40 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.71■□□□□ 0.91
LRRC28Q86X40 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRRC28Q86X40 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRRC28Q86X40 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.71■□□□□ 0.91
LRRC28Q86X40 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LRRC28Q86X40 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
LRRC28Q86X40 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.71■□□□□ 0.91
LRRC28Q86X40 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
LRRC28Q86X40 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRRC28Q86X40 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRRC28Q86X40 SMPD5-203ENST00000639008 1464 ntBASIC20.7■□□□□ 0.9
LRRC28Q86X40 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.7■□□□□ 0.9
LRRC28Q86X40 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
LRRC28Q86X40 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRRC28Q86X40 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRRC28Q86X40 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRRC28Q86X40 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.69■□□□□ 0.9
LRRC28Q86X40 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRRC28Q86X40 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRRC28Q86X40 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LRRC28Q86X40 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRRC28Q86X40 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRRC28Q86X40 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.69■□□□□ 0.9
LRRC28Q86X40 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRRC28Q86X40 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRRC28Q86X40 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LRRC28Q86X40 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LRRC28Q86X40 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LRRC28Q86X40 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.68■□□□□ 0.9
LRRC28Q86X40 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.68■□□□□ 0.9
LRRC28Q86X40 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.68■□□□□ 0.9
LRRC28Q86X40 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
LRRC28Q86X40 CLDN5-201ENST00000403084 2357 ntBASIC20.68■□□□□ 0.9
LRRC28Q86X40 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.68■□□□□ 0.9
LRRC28Q86X40 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.68■□□□□ 0.9
LRRC28Q86X40 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LRRC28Q86X40 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LRRC28Q86X40 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.67■□□□□ 0.9
LRRC28Q86X40 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRRC28Q86X40 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
LRRC28Q86X40 AC025884.2-201ENST00000553429 711 ntBASIC20.67■□□□□ 0.9
LRRC28Q86X40 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRRC28Q86X40 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
LRRC28Q86X40 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
LRRC28Q86X40 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRRC28Q86X40 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRRC28Q86X40 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
LRRC28Q86X40 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRRC28Q86X40 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
LRRC28Q86X40 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.67■□□□□ 0.9
LRRC28Q86X40 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
LRRC28Q86X40 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LRRC28Q86X40 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LRRC28Q86X40 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
LRRC28Q86X40 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
LRRC28Q86X40 HYI-213ENST00000583037 1322 ntTSL 5 BASIC20.66■□□□□ 0.9
LRRC28Q86X40 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.66■□□□□ 0.9
LRRC28Q86X40 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LRRC28Q86X40 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LRRC28Q86X40 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.65■□□□□ 0.9
LRRC28Q86X40 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LRRC28Q86X40 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRRC28Q86X40 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRRC28Q86X40 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRRC28Q86X40 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.65■□□□□ 0.9
LRRC28Q86X40 NTF6A-201ENST00000591175 560 ntBASIC20.65■□□□□ 0.9
LRRC28Q86X40 AC007029.1-201ENST00000604183 313 ntBASIC20.65■□□□□ 0.9
LRRC28Q86X40 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LRRC28Q86X40 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRRC28Q86X40 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
LRRC28Q86X40 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
LRRC28Q86X40 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
LRRC28Q86X40 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
LRRC28Q86X40 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms