Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
TUBA1AQ71U36 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
TUBA1AQ71U36 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TUBA1AQ71U36 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC21.45■■□□□ 1.02
TUBA1AQ71U36 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.45■■□□□ 1.02
TUBA1AQ71U36 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TUBA1AQ71U36 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.45■■□□□ 1.02
TUBA1AQ71U36 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
TUBA1AQ71U36 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
TUBA1AQ71U36 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
TUBA1AQ71U36 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TUBA1AQ71U36 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TUBA1AQ71U36 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TUBA1AQ71U36 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TUBA1AQ71U36 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.44■■□□□ 1.02
TUBA1AQ71U36 AC025884.2-201ENST00000553429 711 ntBASIC21.44■■□□□ 1.02
TUBA1AQ71U36 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
TUBA1AQ71U36 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TUBA1AQ71U36 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TUBA1AQ71U36 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
TUBA1AQ71U36 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TUBA1AQ71U36 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TUBA1AQ71U36 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TUBA1AQ71U36 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TUBA1AQ71U36 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TUBA1AQ71U36 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TUBA1AQ71U36 AC007029.1-201ENST00000604183 313 ntBASIC21.42■■□□□ 1.02
TUBA1AQ71U36 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TUBA1AQ71U36 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.41■■□□□ 1.02
TUBA1AQ71U36 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
TUBA1AQ71U36 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC21.41■■□□□ 1.02
TUBA1AQ71U36 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.41■■□□□ 1.02
TUBA1AQ71U36 ABHD17AP5-201ENST00000580133 923 ntBASIC21.41■■□□□ 1.02
TUBA1AQ71U36 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TUBA1AQ71U36 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
TUBA1AQ71U36 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
TUBA1AQ71U36 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TUBA1AQ71U36 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
TUBA1AQ71U36 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
TUBA1AQ71U36 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.4■■□□□ 1.02
TUBA1AQ71U36 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TUBA1AQ71U36 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TUBA1AQ71U36 HYI-213ENST00000583037 1322 ntTSL 5 BASIC21.4■■□□□ 1.02
TUBA1AQ71U36 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TUBA1AQ71U36 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.4■■□□□ 1.02
TUBA1AQ71U36 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TUBA1AQ71U36 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TUBA1AQ71U36 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.4■■□□□ 1.02
TUBA1AQ71U36 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
TUBA1AQ71U36 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
TUBA1AQ71U36 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TUBA1AQ71U36 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TUBA1AQ71U36 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.39■■□□□ 1.01
TUBA1AQ71U36 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TUBA1AQ71U36 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.39■■□□□ 1.01
TUBA1AQ71U36 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
TUBA1AQ71U36 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
TUBA1AQ71U36 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
TUBA1AQ71U36 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
TUBA1AQ71U36 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TUBA1AQ71U36 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
TUBA1AQ71U36 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
TUBA1AQ71U36 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
TUBA1AQ71U36 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TUBA1AQ71U36 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TUBA1AQ71U36 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TUBA1AQ71U36 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
TUBA1AQ71U36 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TUBA1AQ71U36 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TUBA1AQ71U36 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.38■■□□□ 1.01
TUBA1AQ71U36 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
TUBA1AQ71U36 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TUBA1AQ71U36 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
TUBA1AQ71U36 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TUBA1AQ71U36 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TUBA1AQ71U36 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
TUBA1AQ71U36 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.36■■□□□ 1.01
TUBA1AQ71U36 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.36■■□□□ 1.01
TUBA1AQ71U36 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TUBA1AQ71U36 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.36■■□□□ 1.01
TUBA1AQ71U36 AC093536.1-201ENST00000569153 554 ntBASIC21.36■■□□□ 1.01
TUBA1AQ71U36 MIR3960-201ENST00000583311 91 ntBASIC21.36■■□□□ 1.01
TUBA1AQ71U36 U85056.1-201ENST00000616429 682 ntBASIC21.36■■□□□ 1.01
TUBA1AQ71U36 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.36■■□□□ 1.01
TUBA1AQ71U36 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
TUBA1AQ71U36 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TUBA1AQ71U36 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TUBA1AQ71U36 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TUBA1AQ71U36 RP9P-202ENST00000450133 1212 ntBASIC21.35■■□□□ 1.01
TUBA1AQ71U36 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TUBA1AQ71U36 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TUBA1AQ71U36 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TUBA1AQ71U36 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
TUBA1AQ71U36 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
TUBA1AQ71U36 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TUBA1AQ71U36 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21.35■■□□□ 1.01
TUBA1AQ71U36 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
TUBA1AQ71U36 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
TUBA1AQ71U36 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TUBA1AQ71U36 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms