Protein–RNA interactions for Protein: Q6P435

Putative uncharacterized SMG1-like protein, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q6P435 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Q6P435 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Q6P435 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
Q6P435 DUX4L9-201ENST00000449051 1259 ntBASIC19.68■□□□□ 0.74
Q6P435 AC141586.4-201ENST00000624558 1573 ntBASIC19.68■□□□□ 0.74
Q6P435 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Q6P435 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.68■□□□□ 0.74
Q6P435 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Q6P435 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Q6P435 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Q6P435 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Q6P435 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Q6P435 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Q6P435 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
Q6P435 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Q6P435 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Q6P435 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Q6P435 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Q6P435 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Q6P435 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.67■□□□□ 0.74
Q6P435 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.67■□□□□ 0.74
Q6P435 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC19.67■□□□□ 0.74
Q6P435 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Q6P435 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.66■□□□□ 0.74
Q6P435 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC19.66■□□□□ 0.74
Q6P435 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Q6P435 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.66■□□□□ 0.74
Q6P435 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Q6P435 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC19.66■□□□□ 0.74
Q6P435 AC087393.1-201ENST00000582896 145 ntBASIC19.66■□□□□ 0.74
Q6P435 MIR6765-201ENST00000614092 87 ntBASIC19.66■□□□□ 0.74
Q6P435 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Q6P435 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Q6P435 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Q6P435 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC19.65■□□□□ 0.74
Q6P435 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Q6P435 TMEM202-AS1-202ENST00000565181 2325 ntBASIC19.65■□□□□ 0.74
Q6P435 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Q6P435 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Q6P435 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Q6P435 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Q6P435 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.65■□□□□ 0.74
Q6P435 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC19.65■□□□□ 0.74
Q6P435 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Q6P435 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Q6P435 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Q6P435 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.64■□□□□ 0.73
Q6P435 AC129492.7-201ENST00000622992 756 ntBASIC19.64■□□□□ 0.73
Q6P435 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Q6P435 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Q6P435 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Q6P435 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Q6P435 HLA-L-211ENST00000482052 1765 ntBASIC19.64■□□□□ 0.73
Q6P435 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Q6P435 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Q6P435 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
Q6P435 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Q6P435 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Q6P435 KRT18P60-201ENST00000312876 1297 ntBASIC19.63■□□□□ 0.73
Q6P435 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Q6P435 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Q6P435 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19.63■□□□□ 0.73
Q6P435 BRD4-212ENST00000630599 726 ntTSL 2 BASIC19.63■□□□□ 0.73
Q6P435 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Q6P435 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.63■□□□□ 0.73
Q6P435 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Q6P435 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Q6P435 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Q6P435 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Q6P435 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.62■□□□□ 0.73
Q6P435 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Q6P435 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.62■□□□□ 0.73
Q6P435 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Q6P435 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Q6P435 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Q6P435 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Q6P435 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Q6P435 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Q6P435 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Q6P435 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Q6P435 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Q6P435 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Q6P435 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.6■□□□□ 0.73
Q6P435 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Q6P435 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Q6P435 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.6■□□□□ 0.73
Q6P435 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC19.6■□□□□ 0.73
Q6P435 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Q6P435 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Q6P435 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
Q6P435 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.59■□□□□ 0.73
Q6P435 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Q6P435 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Q6P435 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.59■□□□□ 0.73
Q6P435 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Q6P435 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Q6P435 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Q6P435 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Q6P435 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Q6P435 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms