Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.22■□□□□ 0.83
ATPAF1Q5TC12 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ATPAF1Q5TC12 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.22■□□□□ 0.83
ATPAF1Q5TC12 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
ATPAF1Q5TC12 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.22■□□□□ 0.83
ATPAF1Q5TC12 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
ATPAF1Q5TC12 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.22■□□□□ 0.83
ATPAF1Q5TC12 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATPAF1Q5TC12 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ATPAF1Q5TC12 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATPAF1Q5TC12 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATPAF1Q5TC12 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.21■□□□□ 0.83
ATPAF1Q5TC12 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATPAF1Q5TC12 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATPAF1Q5TC12 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATPAF1Q5TC12 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATPAF1Q5TC12 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.21■□□□□ 0.83
ATPAF1Q5TC12 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
ATPAF1Q5TC12 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATPAF1Q5TC12 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.2■□□□□ 0.82
ATPAF1Q5TC12 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ATPAF1Q5TC12 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
ATPAF1Q5TC12 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
ATPAF1Q5TC12 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ATPAF1Q5TC12 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
ATPAF1Q5TC12 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATPAF1Q5TC12 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.2■□□□□ 0.82
ATPAF1Q5TC12 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATPAF1Q5TC12 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
ATPAF1Q5TC12 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATPAF1Q5TC12 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
ATPAF1Q5TC12 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATPAF1Q5TC12 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.19■□□□□ 0.82
ATPAF1Q5TC12 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.19■□□□□ 0.82
ATPAF1Q5TC12 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ATPAF1Q5TC12 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATPAF1Q5TC12 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATPAF1Q5TC12 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATPAF1Q5TC12 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
ATPAF1Q5TC12 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.18■□□□□ 0.82
ATPAF1Q5TC12 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATPAF1Q5TC12 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATPAF1Q5TC12 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ATPAF1Q5TC12 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
ATPAF1Q5TC12 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATPAF1Q5TC12 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATPAF1Q5TC12 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.17■□□□□ 0.82
ATPAF1Q5TC12 U85056.1-201ENST00000616429 682 ntBASIC20.17■□□□□ 0.82
ATPAF1Q5TC12 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATPAF1Q5TC12 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATPAF1Q5TC12 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ATPAF1Q5TC12 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
ATPAF1Q5TC12 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.16■□□□□ 0.82
ATPAF1Q5TC12 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ATPAF1Q5TC12 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATPAF1Q5TC12 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATPAF1Q5TC12 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATPAF1Q5TC12 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ATPAF1Q5TC12 AC097639.1-201ENST00000565519 1891 ntBASIC20.16■□□□□ 0.82
ATPAF1Q5TC12 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.15■□□□□ 0.82
ATPAF1Q5TC12 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.15■□□□□ 0.82
ATPAF1Q5TC12 NTF6A-201ENST00000591175 560 ntBASIC20.15■□□□□ 0.82
ATPAF1Q5TC12 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATPAF1Q5TC12 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATPAF1Q5TC12 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.15■□□□□ 0.82
ATPAF1Q5TC12 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
ATPAF1Q5TC12 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.15■□□□□ 0.82
ATPAF1Q5TC12 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATPAF1Q5TC12 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ATPAF1Q5TC12 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ATPAF1Q5TC12 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
ATPAF1Q5TC12 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
ATPAF1Q5TC12 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.14■□□□□ 0.81
ATPAF1Q5TC12 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ATPAF1Q5TC12 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ATPAF1Q5TC12 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ATPAF1Q5TC12 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ATPAF1Q5TC12 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ATPAF1Q5TC12 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ATPAF1Q5TC12 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ATPAF1Q5TC12 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ATPAF1Q5TC12 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.13■□□□□ 0.81
ATPAF1Q5TC12 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ATPAF1Q5TC12 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
ATPAF1Q5TC12 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
ATPAF1Q5TC12 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.13■□□□□ 0.81
ATPAF1Q5TC12 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ATPAF1Q5TC12 AL592293.1-201ENST00000502889 1188 ntBASIC20.13■□□□□ 0.81
ATPAF1Q5TC12 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
ATPAF1Q5TC12 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.13■□□□□ 0.81
ATPAF1Q5TC12 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ATPAF1Q5TC12 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
ATPAF1Q5TC12 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
ATPAF1Q5TC12 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ATPAF1Q5TC12 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ATPAF1Q5TC12 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.12■□□□□ 0.81
ATPAF1Q5TC12 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ATPAF1Q5TC12 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.12■□□□□ 0.81
ATPAF1Q5TC12 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
ATPAF1Q5TC12 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms