Protein–RNA interactions for Protein: P78345

RPP38, Ribonuclease P protein subunit p38, humanhuman

Known RBP Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPP38P78345 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
RPP38P78345 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC22.08■■□□□ 1.13
RPP38P78345 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.12
RPP38P78345 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
RPP38P78345 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC22.08■■□□□ 1.12
RPP38P78345 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RPP38P78345 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
RPP38P78345 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RPP38P78345 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RPP38P78345 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RPP38P78345 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
RPP38P78345 GUK1-208ENST00000366728 842 ntTSL 2 BASIC22.07■■□□□ 1.12
RPP38P78345 BHLHE23-202ENST00000612929 1109 ntBASIC22.07■■□□□ 1.12
RPP38P78345 AC074183.2-201ENST00000623112 922 ntBASIC22.07■■□□□ 1.12
RPP38P78345 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
RPP38P78345 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RPP38P78345 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RPP38P78345 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
RPP38P78345 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RPP38P78345 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
RPP38P78345 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
RPP38P78345 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC22.06■■□□□ 1.12
RPP38P78345 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC22.06■■□□□ 1.12
RPP38P78345 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC22.06■■□□□ 1.12
RPP38P78345 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
RPP38P78345 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RPP38P78345 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
RPP38P78345 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC22.06■■□□□ 1.12
RPP38P78345 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
RPP38P78345 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
RPP38P78345 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC22.05■■□□□ 1.12
RPP38P78345 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC22.05■■□□□ 1.12
RPP38P78345 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC22.05■■□□□ 1.12
RPP38P78345 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC22.05■■□□□ 1.12
RPP38P78345 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RPP38P78345 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
RPP38P78345 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC22.04■■□□□ 1.12
RPP38P78345 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
RPP38P78345 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RPP38P78345 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RPP38P78345 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RPP38P78345 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
RPP38P78345 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
RPP38P78345 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RPP38P78345 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC22.03■■□□□ 1.12
RPP38P78345 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
RPP38P78345 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RPP38P78345 AC133561.1-201ENST00000568600 2415 ntBASIC22.03■■□□□ 1.12
RPP38P78345 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC22.02■■□□□ 1.12
RPP38P78345 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RPP38P78345 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC22.02■■□□□ 1.12
RPP38P78345 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
RPP38P78345 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC22.02■■□□□ 1.12
RPP38P78345 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC22.02■■□□□ 1.12
RPP38P78345 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RPP38P78345 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC22.02■■□□□ 1.11
RPP38P78345 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RPP38P78345 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RPP38P78345 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
RPP38P78345 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC22.01■■□□□ 1.11
RPP38P78345 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
RPP38P78345 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
RPP38P78345 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
RPP38P78345 RPS2P7-201ENST00000447334 885 ntBASIC22.01■■□□□ 1.11
RPP38P78345 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC22.01■■□□□ 1.11
RPP38P78345 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
RPP38P78345 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC22.01■■□□□ 1.11
RPP38P78345 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RPP38P78345 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RPP38P78345 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC22■■□□□ 1.11
RPP38P78345 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RPP38P78345 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
RPP38P78345 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
RPP38P78345 AC087393.1-201ENST00000582896 145 ntBASIC21.99■■□□□ 1.11
RPP38P78345 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.99■■□□□ 1.11
RPP38P78345 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RPP38P78345 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.99■■□□□ 1.11
RPP38P78345 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RPP38P78345 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RPP38P78345 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RPP38P78345 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
RPP38P78345 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RPP38P78345 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RPP38P78345 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RPP38P78345 LINC01124-201ENST00000409786 2117 ntBASIC21.98■■□□□ 1.11
RPP38P78345 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.98■■□□□ 1.11
RPP38P78345 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
RPP38P78345 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.98■■□□□ 1.11
RPP38P78345 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.98■■□□□ 1.11
RPP38P78345 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.98■■□□□ 1.11
RPP38P78345 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RPP38P78345 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RPP38P78345 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
RPP38P78345 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.97■■□□□ 1.11
RPP38P78345 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RPP38P78345 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
RPP38P78345 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RPP38P78345 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.97■■□□□ 1.11
RPP38P78345 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RPP38P78345 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms