Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
AP3S2P59780 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
AP3S2P59780 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.1■□□□□ 0.81
AP3S2P59780 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
AP3S2P59780 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
AP3S2P59780 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.1■□□□□ 0.81
AP3S2P59780 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
AP3S2P59780 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
AP3S2P59780 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
AP3S2P59780 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
AP3S2P59780 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
AP3S2P59780 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
AP3S2P59780 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
AP3S2P59780 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.09■□□□□ 0.81
AP3S2P59780 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.09■□□□□ 0.81
AP3S2P59780 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC20.09■□□□□ 0.81
AP3S2P59780 AC097358.2-201ENST00000607541 1159 ntBASIC20.09■□□□□ 0.81
AP3S2P59780 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
AP3S2P59780 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
AP3S2P59780 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
AP3S2P59780 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
AP3S2P59780 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.09■□□□□ 0.81
AP3S2P59780 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.09■□□□□ 0.81
AP3S2P59780 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.09■□□□□ 0.81
AP3S2P59780 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
AP3S2P59780 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.08■□□□□ 0.81
AP3S2P59780 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
AP3S2P59780 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
AP3S2P59780 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
AP3S2P59780 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.08■□□□□ 0.8
AP3S2P59780 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.08■□□□□ 0.8
AP3S2P59780 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.07■□□□□ 0.8
AP3S2P59780 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
AP3S2P59780 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
AP3S2P59780 ABCB10P4-201ENST00000566803 2184 ntBASIC20.07■□□□□ 0.8
AP3S2P59780 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
AP3S2P59780 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
AP3S2P59780 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC20.07■□□□□ 0.8
AP3S2P59780 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.07■□□□□ 0.8
AP3S2P59780 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
AP3S2P59780 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
AP3S2P59780 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
AP3S2P59780 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
AP3S2P59780 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.06■□□□□ 0.8
AP3S2P59780 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
AP3S2P59780 C9orf163-202ENST00000624034 2573 ntBASIC20.05■□□□□ 0.8
AP3S2P59780 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
AP3S2P59780 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
AP3S2P59780 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.05■□□□□ 0.8
AP3S2P59780 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
AP3S2P59780 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.05■□□□□ 0.8
AP3S2P59780 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.05■□□□□ 0.8
AP3S2P59780 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
AP3S2P59780 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
AP3S2P59780 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.04■□□□□ 0.8
AP3S2P59780 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
AP3S2P59780 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
AP3S2P59780 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
AP3S2P59780 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
AP3S2P59780 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
AP3S2P59780 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
AP3S2P59780 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
AP3S2P59780 CIB2-204ENST00000557846 934 ntTSL 3 BASIC20.03■□□□□ 0.8
AP3S2P59780 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
AP3S2P59780 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
AP3S2P59780 HNRNPLP2-201ENST00000568980 1570 ntBASIC20.03■□□□□ 0.8
AP3S2P59780 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
AP3S2P59780 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
AP3S2P59780 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
AP3S2P59780 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
AP3S2P59780 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
AP3S2P59780 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
AP3S2P59780 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
AP3S2P59780 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
AP3S2P59780 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
AP3S2P59780 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.79
AP3S2P59780 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
AP3S2P59780 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
AP3S2P59780 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.02■□□□□ 0.79
AP3S2P59780 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
AP3S2P59780 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.01■□□□□ 0.79
AP3S2P59780 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
AP3S2P59780 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC20.01■□□□□ 0.79
AP3S2P59780 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC20.01■□□□□ 0.79
AP3S2P59780 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.01■□□□□ 0.79
AP3S2P59780 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
AP3S2P59780 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
AP3S2P59780 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
AP3S2P59780 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
AP3S2P59780 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
AP3S2P59780 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
AP3S2P59780 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC20■□□□□ 0.79
AP3S2P59780 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
AP3S2P59780 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20■□□□□ 0.79
AP3S2P59780 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
AP3S2P59780 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20■□□□□ 0.79
AP3S2P59780 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
AP3S2P59780 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
AP3S2P59780 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
AP3S2P59780 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms