Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
PEX3P56589 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
PEX3P56589 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC25.95■■□□□ 1.75
PEX3P56589 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC25.95■■□□□ 1.75
PEX3P56589 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
PEX3P56589 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC25.95■■□□□ 1.74
PEX3P56589 KRT18P24-201ENST00000344739 1156 ntBASIC25.95■■□□□ 1.74
PEX3P56589 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
PEX3P56589 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC25.95■■□□□ 1.74
PEX3P56589 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC25.95■■□□□ 1.74
PEX3P56589 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
PEX3P56589 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
PEX3P56589 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
PEX3P56589 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
PEX3P56589 AL451085.2-201ENST00000605085 799 ntBASIC25.94■■□□□ 1.74
PEX3P56589 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
PEX3P56589 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
PEX3P56589 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
PEX3P56589 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
PEX3P56589 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
PEX3P56589 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC25.93■■□□□ 1.74
PEX3P56589 THA1P-201ENST00000590384 1145 ntBASIC25.93■■□□□ 1.74
PEX3P56589 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
PEX3P56589 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC25.93■■□□□ 1.74
PEX3P56589 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC25.93■■□□□ 1.74
PEX3P56589 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC25.93■■□□□ 1.74
PEX3P56589 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC25.93■■□□□ 1.74
PEX3P56589 SSSCA1-AS1-201ENST00000567594 614 ntBASIC25.92■■□□□ 1.74
PEX3P56589 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC25.92■■□□□ 1.74
PEX3P56589 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC25.92■■□□□ 1.74
PEX3P56589 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC25.91■■□□□ 1.74
PEX3P56589 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
PEX3P56589 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
PEX3P56589 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
PEX3P56589 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
PEX3P56589 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC25.91■■□□□ 1.74
PEX3P56589 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
PEX3P56589 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC25.91■■□□□ 1.74
PEX3P56589 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC25.91■■□□□ 1.74
PEX3P56589 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC25.91■■□□□ 1.74
PEX3P56589 AC022211.4-201ENST00000625094 2161 ntBASIC25.9■■□□□ 1.74
PEX3P56589 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC25.9■■□□□ 1.74
PEX3P56589 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC25.9■■□□□ 1.74
PEX3P56589 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
PEX3P56589 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
PEX3P56589 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
PEX3P56589 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
PEX3P56589 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC25.89■■□□□ 1.74
PEX3P56589 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
PEX3P56589 TK2-216ENST00000564917 1156 ntTSL 3 BASIC25.89■■□□□ 1.74
PEX3P56589 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
PEX3P56589 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
PEX3P56589 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
PEX3P56589 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC25.88■■□□□ 1.73
PEX3P56589 AC090877.2-201ENST00000558441 1738 ntBASIC25.88■■□□□ 1.73
PEX3P56589 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC25.88■■□□□ 1.73
PEX3P56589 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
PEX3P56589 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
PEX3P56589 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
PEX3P56589 PRTG-204ENST00000561292 833 ntTSL 3 BASIC25.88■■□□□ 1.73
PEX3P56589 AC011551.1-201ENST00000614101 683 ntBASIC25.88■■□□□ 1.73
PEX3P56589 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
PEX3P56589 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC25.88■■□□□ 1.73
PEX3P56589 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC25.87■■□□□ 1.73
PEX3P56589 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
PEX3P56589 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
PEX3P56589 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC25.87■■□□□ 1.73
PEX3P56589 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
PEX3P56589 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC25.87■■□□□ 1.73
PEX3P56589 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
PEX3P56589 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
PEX3P56589 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
PEX3P56589 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
PEX3P56589 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
PEX3P56589 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
PEX3P56589 GAK-223ENST00000628912 497 ntTSL 5 BASIC25.86■■□□□ 1.73
PEX3P56589 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
PEX3P56589 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
PEX3P56589 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
PEX3P56589 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC25.85■■□□□ 1.73
PEX3P56589 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
PEX3P56589 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PEX3P56589 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PEX3P56589 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PEX3P56589 AC009299.2-201ENST00000482477 511 ntBASIC25.84■■□□□ 1.73
PEX3P56589 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PEX3P56589 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
PEX3P56589 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
PEX3P56589 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
PEX3P56589 MIR4281-201ENST00000580852 62 ntBASIC25.83■■□□□ 1.73
PEX3P56589 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
PEX3P56589 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC25.83■■□□□ 1.73
PEX3P56589 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC25.83■■□□□ 1.72
PEX3P56589 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
PEX3P56589 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC25.82■■□□□ 1.72
PEX3P56589 MIR6089-201ENST00000616698 64 ntBASIC25.82■■□□□ 1.72
PEX3P56589 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
PEX3P56589 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC25.82■■□□□ 1.72
PEX3P56589 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
PEX3P56589 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 273.4 ms