Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HCFC1P51610 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
HCFC1P51610 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HCFC1P51610 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.67■□□□□ 0.9
HCFC1P51610 RARRES2P6-201ENST00000567333 442 ntBASIC20.67■□□□□ 0.9
HCFC1P51610 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.67■□□□□ 0.9
HCFC1P51610 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HCFC1P51610 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HCFC1P51610 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
HCFC1P51610 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.66■□□□□ 0.9
HCFC1P51610 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.66■□□□□ 0.9
HCFC1P51610 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.66■□□□□ 0.9
HCFC1P51610 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HCFC1P51610 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HCFC1P51610 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
HCFC1P51610 ZNRF2P3-201ENST00000424200 374 ntBASIC20.65■□□□□ 0.9
HCFC1P51610 AC133561.4-201ENST00000566112 224 ntBASIC20.65■□□□□ 0.9
HCFC1P51610 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC20.65■□□□□ 0.9
HCFC1P51610 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.65■□□□□ 0.9
HCFC1P51610 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HCFC1P51610 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HCFC1P51610 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.65■□□□□ 0.9
HCFC1P51610 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.65■□□□□ 0.9
HCFC1P51610 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.65■□□□□ 0.9
HCFC1P51610 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
HCFC1P51610 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
HCFC1P51610 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.64■□□□□ 0.9
HCFC1P51610 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HCFC1P51610 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
HCFC1P51610 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HCFC1P51610 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HCFC1P51610 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
HCFC1P51610 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HCFC1P51610 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
HCFC1P51610 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HCFC1P51610 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HCFC1P51610 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HCFC1P51610 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HCFC1P51610 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
HCFC1P51610 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HCFC1P51610 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.63■□□□□ 0.89
HCFC1P51610 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.63■□□□□ 0.89
HCFC1P51610 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HCFC1P51610 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HCFC1P51610 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.62■□□□□ 0.89
HCFC1P51610 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HCFC1P51610 AC005837.3-201ENST00000612163 286 ntBASIC20.62■□□□□ 0.89
HCFC1P51610 AC106739.1-201ENST00000617035 715 ntBASIC20.62■□□□□ 0.89
HCFC1P51610 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
HCFC1P51610 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HCFC1P51610 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.62■□□□□ 0.89
HCFC1P51610 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HCFC1P51610 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
HCFC1P51610 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.62■□□□□ 0.89
HCFC1P51610 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HCFC1P51610 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.61■□□□□ 0.89
HCFC1P51610 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HCFC1P51610 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.61■□□□□ 0.89
HCFC1P51610 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HCFC1P51610 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HCFC1P51610 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HCFC1P51610 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
HCFC1P51610 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.6■□□□□ 0.89
HCFC1P51610 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
HCFC1P51610 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.6■□□□□ 0.89
HCFC1P51610 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.6■□□□□ 0.89
HCFC1P51610 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.6■□□□□ 0.89
HCFC1P51610 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
HCFC1P51610 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HCFC1P51610 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.59■□□□□ 0.89
HCFC1P51610 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.59■□□□□ 0.89
HCFC1P51610 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC20.58■□□□□ 0.89
HCFC1P51610 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
HCFC1P51610 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.58■□□□□ 0.89
HCFC1P51610 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HCFC1P51610 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
HCFC1P51610 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.58■□□□□ 0.88
HCFC1P51610 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
HCFC1P51610 AC026271.2-201ENST00000428091 497 ntBASIC20.58■□□□□ 0.88
HCFC1P51610 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.58■□□□□ 0.88
HCFC1P51610 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.58■□□□□ 0.88
HCFC1P51610 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.58■□□□□ 0.88
HCFC1P51610 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HCFC1P51610 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HCFC1P51610 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HCFC1P51610 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HCFC1P51610 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.57■□□□□ 0.88
HCFC1P51610 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HCFC1P51610 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.57■□□□□ 0.88
HCFC1P51610 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HCFC1P51610 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
HCFC1P51610 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HCFC1P51610 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.56■□□□□ 0.88
HCFC1P51610 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HCFC1P51610 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HCFC1P51610 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HCFC1P51610 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
HCFC1P51610 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.56■□□□□ 0.88
HCFC1P51610 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HCFC1P51610 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms