Protein–RNA interactions for Protein: P43588

RPN11, Ubiquitin carboxyl-terminal hydrolase RPN11, yeastyeast

Known RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN11P43588 APJ1YNL077W 1587 nt6.54□□□□□ -1.36
RPN11P43588 COQ6YGR255C 1440 nt6.54□□□□□ -1.36
RPN11P43588 YLF2YHL014C 1218 nt6.54□□□□□ -1.36
RPN11P43588 ATM1YMR301C 2073 nt6.54□□□□□ -1.36
RPN11P43588 YHL017WYHL017W 1599 nt6.53□□□□□ -1.36
RPN11P43588 HSP31YDR533C 714 nt6.53□□□□□ -1.36
RPN11P43588 TAL1YLR354C 1008 nt6.53□□□□□ -1.36
RPN11P43588 VMA4YOR332W 702 nt6.53□□□□□ -1.36
RPN11P43588 SCT1YBL011W 2280 nt6.53□□□□□ -1.36
RPN11P43588 PYC1YGL062W 3537 nt6.52□□□□□ -1.37
RPN11P43588 GAT1YFL021W 1533 nt6.52□□□□□ -1.37
RPN11P43588 ACF2YLR144C 2340 nt6.52□□□□□ -1.37
RPN11P43588 MRS1YIR021W 1092 nt6.52□□□□□ -1.37
RPN11P43588 POP3YNL282W 588 nt6.52□□□□□ -1.37
RPN11P43588 AIM10YER087W 1731 nt6.52□□□□□ -1.37
RPN11P43588 NDE1YMR145C 1683 nt6.52□□□□□ -1.37
RPN11P43588 SNU71YGR013W 1863 nt6.51□□□□□ -1.37
RPN11P43588 SAC6YDR129C 1929 nt6.51□□□□□ -1.37
RPN11P43588 YGL088WYGL088W 366 nt6.51□□□□□ -1.37
RPN11P43588 YKE4YIL023C 1041 nt6.51□□□□□ -1.37
RPN11P43588 GFD1YMR255W 567 nt6.51□□□□□ -1.37
RPN11P43588 MAP2YBL091C 1266 nt6.51□□□□□ -1.37
RPN11P43588 ARG8YOL140W 1272 nt6.51□□□□□ -1.37
RPN11P43588 DCI1YOR180C 816 nt6.51□□□□□ -1.37
RPN11P43588 CIT3YPR001W 1461 nt6.51□□□□□ -1.37
RPN11P43588 VMA13YPR036W 1437 nt6.5□□□□□ -1.37
RPN11P43588 RQC1YDR333C 2172 nt6.5□□□□□ -1.37
RPN11P43588 BIM1YER016W 1035 nt6.5□□□□□ -1.37
RPN11P43588 ROX3YBL093C 663 nt6.5□□□□□ -1.37
RPN11P43588 YIL067CYIL067C 2037 nt6.5□□□□□ -1.37
RPN11P43588 YOL036WYOL036W 2286 nt6.5□□□□□ -1.37
RPN11P43588 SRV2YNL138W 1581 nt6.49□□□□□ -1.37
RPN11P43588 BNA6YFR047C 888 nt6.49□□□□□ -1.37
RPN11P43588 YKR041WYKR041W 753 nt6.49□□□□□ -1.37
RPN11P43588 PRM1YNL279W 1986 nt6.48□□□□□ -1.37
RPN11P43588 RHO4YKR055W 876 nt6.48□□□□□ -1.37
RPN11P43588 YIL108WYIL108W 2091 nt6.48□□□□□ -1.37
RPN11P43588 NPL6YMR091C 1308 nt6.48□□□□□ -1.37
RPN11P43588 SER33YIL074C 1410 nt6.47□□□□□ -1.37
RPN11P43588 YOR389WYOR389W 1875 nt6.47□□□□□ -1.37
RPN11P43588 HXT5YHR096C 1779 nt6.46□□□□□ -1.37
RPN11P43588 YPT32YGL210W 669 nt6.46□□□□□ -1.38
RPN11P43588 UBA3YPR066W 900 nt6.46□□□□□ -1.38
RPN11P43588 DAL7YIR031C 1665 nt6.45□□□□□ -1.38
RPN11P43588 ULA1YPL003W 1389 nt6.45□□□□□ -1.38
RPN11P43588 YPR123CYPR123C 435 nt6.45□□□□□ -1.38
RPN11P43588 CMK2YOL016C 1344 nt6.45□□□□□ -1.38
RPN11P43588 SMC5YOL034W 3282 nt6.45□□□□□ -1.38
RPN11P43588 MCH4YOL119C 1506 nt6.45□□□□□ -1.38
RPN11P43588 ACS2YLR153C 2052 nt6.45□□□□□ -1.38
RPN11P43588 PFK2YMR205C 2880 nt6.44□□□□□ -1.38
RPN11P43588 PUS6YGR169C 1215 nt6.44□□□□□ -1.38
RPN11P43588 EFM3YJR129C 1020 nt6.44□□□□□ -1.38
RPN11P43588 DCS2YOR173W 1062 nt6.44□□□□□ -1.38
RPN11P43588 PZF1YPR186C 1290 nt6.44□□□□□ -1.38
RPN11P43588 GAL10YBR019C 2100 nt6.44□□□□□ -1.38
RPN11P43588 JEM1YJL073W 1938 nt6.44□□□□□ -1.38
RPN11P43588 PRP24YMR268C 1335 nt6.44□□□□□ -1.38
RPN11P43588 NUP116YMR047C 3342 nt6.43□□□□□ -1.38
RPN11P43588 YDR541CYDR541C 1035 nt6.43□□□□□ -1.38
RPN11P43588 YOR300WYOR300W 309 nt6.43□□□□□ -1.38
RPN11P43588 MID1YNL291C 1647 nt6.43□□□□□ -1.38
RPN11P43588 RRP46YGR095C 672 nt6.42□□□□□ -1.38
RPN11P43588 YNG2YHR090C 849 nt6.42□□□□□ -1.38
RPN11P43588 YBL010CYBL010C 843 nt6.42□□□□□ -1.38
RPN11P43588 RBD2YPL246C 789 nt6.42□□□□□ -1.38
RPN11P43588 CDC13YDL220C 2775 nt6.41□□□□□ -1.38
RPN11P43588 MRPL39YML009C 213 nt6.41□□□□□ -1.38
RPN11P43588 YIF1YNL263C 945 nt6.41□□□□□ -1.38
RPN11P43588 PAT1YCR077C 2391 nt6.41□□□□□ -1.38
RPN11P43588 GPT2YKR067W 2232 nt6.41□□□□□ -1.38
RPN11P43588 SHO1YER118C 1104 nt6.4□□□□□ -1.38
RPN11P43588 ICS3YJL077C 396 nt6.4□□□□□ -1.38
RPN11P43588 YNL217WYNL217W 981 nt6.4□□□□□ -1.38
RPN11P43588 ELC1YPL046C 300 nt6.4□□□□□ -1.38
RPN11P43588 REG2YBR050C 1017 nt6.4□□□□□ -1.38
RPN11P43588 ERG12YMR208W 1332 nt6.4□□□□□ -1.39
RPN11P43588 YNL040WYNL040W 1371 nt6.4□□□□□ -1.39
RPN11P43588 YEH1YLL012W 1722 nt6.39□□□□□ -1.39
RPN11P43588 YFL034WYFL034W 3222 nt6.39□□□□□ -1.39
RPN11P43588 FAU1YER183C 636 nt6.39□□□□□ -1.39
RPN11P43588 MF(ALPHA)2YGL089C 363 nt6.39□□□□□ -1.39
RPN11P43588 QDR3YBR043C 2070 nt6.38□□□□□ -1.39
RPN11P43588 SEH1YGL100W 1050 nt6.38□□□□□ -1.39
RPN11P43588 YEH2YLR020C 1617 nt6.38□□□□□ -1.39
RPN11P43588 AVT3YKL146W 2079 nt6.38□□□□□ -1.39
RPN11P43588 EXO70YJL085W 1872 nt6.37□□□□□ -1.39
RPN11P43588 DFG5YMR238W 1377 nt6.37□□□□□ -1.39
RPN11P43588 YDL027CYDL027C 1263 nt6.37□□□□□ -1.39
RPN11P43588 GPI11YDR302W 660 nt6.37□□□□□ -1.39
RPN11P43588 ELP3YPL086C 1674 nt6.36□□□□□ -1.39
RPN11P43588 MTQ2YDR140W 666 nt6.36□□□□□ -1.39
RPN11P43588 TYS1YGR185C 1185 nt6.36□□□□□ -1.39
RPN11P43588 PIF1YML061C 2580 nt6.36□□□□□ -1.39
RPN11P43588 BAP2YBR068C 1830 nt6.36□□□□□ -1.39
RPN11P43588 CDC16YKL022C 2523 nt6.36□□□□□ -1.39
RPN11P43588 DOA1YKL213C 2148 nt6.35□□□□□ -1.39
RPN11P43588 MRF1YGL143C 1242 nt6.35□□□□□ -1.39
RPN11P43588 CTF8YHR191C 402 nt6.35□□□□□ -1.39
RPN11P43588 REV7YIL139C 738 nt6.35□□□□□ -1.39
Retrieved 100 of 7,029 protein–RNA pairs in 118.2 ms