RNA–Protein interactions for RNA: YKL022C

CDC16, Transcript of Subunit of the anaphase-promoting complex/cyclosome (APC/C), yeastyeast

Gene CDC16, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC16YKL022C DRS1P32892 752 aaKnown RBP14.59□□□□□ -0.07
CDC16YKL022C TFA1P36100 482 aa13.43□□□□□ -0.26
CDC16YKL022C BFR2Q06631 534 aaKnown RBP13.22□□□□□ -0.29
CDC16YKL022C MTC1P47018 478 aaKnown RBP13.16□□□□□ -0.3
CDC16YKL022C RQC2Q12532 1038 aaKnown RBP12.66□□□□□ -0.38
CDC16YKL022C AVT3P36062 692 aa12.23□□□□□ -0.45
CDC16YKL022C TAF7Q05021 590 aa12.14□□□□□ -0.47
CDC16YKL022C DIP2Q12220 943 aaPredicted RBP11.96□□□□□ -0.49
CDC16YKL022C DMA1P38823 416 aa11.6□□□□□ -0.55
CDC16YKL022C LEO1P38439 464 aa11.28□□□□□ -0.6
CDC16YKL022C RSE1Q04693 1361 aaKnown RBP10.87□□□□□ -0.67
CDC16YKL022C PTP3P40048 928 aa10.83□□□□□ -0.68
CDC16YKL022C LEU3P08638 886 aa10.68□□□□□ -0.7
CDC16YKL022C SAS10Q12136 610 aaPredicted RBP10.55□□□□□ -0.72
CDC16YKL022C SSP1P38871 571 aa10.45□□□□□ -0.74
CDC16YKL022C DMA2P53924 522 aa10.44□□□□□ -0.74
CDC16YKL022C RPL17AP05740 184 aaKnown RBP10.41□□□□□ -0.74
CDC16YKL022C RPL17BP46990 184 aaKnown RBP10.41□□□□□ -0.74
CDC16YKL022C ABP1P15891 592 aaKnown RBP10.35□□□□□ -0.75
CDC16YKL022C RIM101P33400 625 aa10.33□□□□□ -0.76
CDC16YKL022C ISW2Q08773 1120 aa10.32□□□□□ -0.76
CDC16YKL022C RPN1P38764 993 aaKnown RBP10.25□□□□□ -0.77
CDC16YKL022C RPG1P38249 964 aaKnown RBP10.21□□□□□ -0.77
CDC16YKL022C SPT21P35209 758 aa10.2□□□□□ -0.78
CDC16YKL022C RLF2Q12495 606 aa10.18□□□□□ -0.78
CDC16YKL022C REB1P21538 810 aa10.1□□□□□ -0.79
CDC16YKL022C OXP1P28273 1286 aa10.1□□□□□ -0.79
CDC16YKL022C IFH1P39520 1085 aa10.09□□□□□ -0.79
CDC16YKL022C ARP8Q12386 881 aaKnown RBP RIP-Chip data10.08□□□□□ -0.8not detected
CDC16YKL022C YAH1Q12184 172 aaKnown RBP10.07□□□□□ -0.8
CDC16YKL022C YLR271WQ06152 274 aa10.04□□□□□ -0.8
CDC16YKL022C CKB1P43639 278 aa9.99□□□□□ -0.81
CDC16YKL022C MGA2P40578 1113 aa9.93□□□□□ -0.82
CDC16YKL022C SPB4P25808 606 aaPredicted RBP9.86□□□□□ -0.83
CDC16YKL022C AIM44Q99299 758 aa9.85□□□□□ -0.83
CDC16YKL022C CST9Q06032 482 aa9.82□□□□□ -0.84
CDC16YKL022C YIL055CP40523 627 aaKnown RBP9.82□□□□□ -0.84
CDC16YKL022C NAP1P25293 417 aaKnown RBP9.81□□□□□ -0.84
CDC16YKL022C PRI1P10363 409 aa9.8□□□□□ -0.84
CDC16YKL022C ORC1P54784 914 aaPredicted RBP9.78□□□□□ -0.84
CDC16YKL022C IOC4Q04213 475 aa9.76□□□□□ -0.85
CDC16YKL022C YPR148CQ06523 435 aa9.73□□□□□ -0.85
CDC16YKL022C VPS70P47161 811 aa9.73□□□□□ -0.85
CDC16YKL022C RSM7P47150 247 aa9.71□□□□□ -0.86
CDC16YKL022C YML020WQ03722 664 aa9.71□□□□□ -0.86
CDC16YKL022C KIN1P13185 1064 aa9.7□□□□□ -0.86
CDC16YKL022C SET1P38827 1080 aaKnown RBP9.69□□□□□ -0.86
CDC16YKL022C NOP8Q08287 484 aaPredicted RBP9.65□□□□□ -0.86
CDC16YKL022C RAM2P29703 316 aa9.63□□□□□ -0.87
CDC16YKL022C DSF2P38213 736 aa9.63□□□□□ -0.87
CDC16YKL022C PSD2P53037 1138 aaKnown RBP9.61□□□□□ -0.87
CDC16YKL022C YNR021WP53723 404 aaKnown RBP9.6□□□□□ -0.87
CDC16YKL022C YKR023WP36119 530 aaKnown RBP9.56□□□□□ -0.88
CDC16YKL022C HGH1P48362 394 aaKnown RBP9.56□□□□□ -0.88
CDC16YKL022C PBS2P08018 668 aa9.53□□□□□ -0.88
CDC16YKL022C GLC3P32775 704 aa9.53□□□□□ -0.88
CDC16YKL022C SLX8P40072 274 aa9.53□□□□□ -0.88
CDC16YKL022C GUA1P38625 525 aaKnown RBP9.51□□□□□ -0.89
CDC16YKL022C AIM7Q12156 149 aa9.5□□□□□ -0.89
CDC16YKL022C GEF1P37020 779 aa9.46□□□□□ -0.89
CDC16YKL022C AI2P03876 854 aa9.45□□□□□ -0.9
CDC16YKL022C SSA1P10591 642 aaKnown RBP9.45□□□□□ -0.9
CDC16YKL022C SUB2Q07478 446 aaKnown RBP9.42□□□□□ -0.9
CDC16YKL022C MAM3Q12296 706 aa9.4□□□□□ -0.9
CDC16YKL022C DIT2P21595 489 aa9.39□□□□□ -0.91
CDC16YKL022C TSR3Q12094 313 aaKnown RBP9.39□□□□□ -0.91
CDC16YKL022C RCR1P38212 213 aa9.39□□□□□ -0.91
CDC16YKL022C AAD16Q02895 342 aa9.39□□□□□ -0.91
CDC16YKL022C NUP42P49686 430 aaKnown RBP9.38□□□□□ -0.91
CDC16YKL022C IES2P40154 320 aa9.37□□□□□ -0.91
CDC16YKL022C HPC2Q01448 625 aa9.36□□□□□ -0.91
CDC16YKL022C HOP09932 586 aa9.35□□□□□ -0.91
CDC16YKL022C TFB3Q03290 321 aa9.34□□□□□ -0.91
CDC16YKL022C TFC8Q12308 588 aa9.34□□□□□ -0.91
CDC16YKL022C MRX12P47084 519 aa9.33□□□□□ -0.92
CDC16YKL022C NOP7P53261 605 aaKnown RBP9.32□□□□□ -0.92
CDC16YKL022C MAK11P20484 414 aaKnown RBP9.29□□□□□ -0.92
CDC16YKL022C MAK21Q12176 1025 aaKnown RBP9.29□□□□□ -0.92
CDC16YKL022C DCD1P06773 312 aa9.28□□□□□ -0.92
CDC16YKL022C PKC1P24583 1151 aa9.26□□□□□ -0.93
CDC16YKL022C MRM1P25270 412 aa9.24□□□□□ -0.93
CDC16YKL022C REF2P42073 533 aaPredicted RBP9.23□□□□□ -0.93
CDC16YKL022C ATF2P53296 535 aa9.23□□□□□ -0.93
CDC16YKL022C BBC1P47068 1157 aa9.22□□□□□ -0.93
CDC16YKL022C SNU71P53207 620 aaKnown RBP9.22□□□□□ -0.93
CDC16YKL022C GLN1P32288 370 aaKnown RBP9.21□□□□□ -0.94
CDC16YKL022C PAM1P37304 830 aaKnown RBP9.2□□□□□ -0.94
CDC16YKL022C BIM1P40013 344 aa9.2□□□□□ -0.94
CDC16YKL022C BRL1P38770 471 aa9.19□□□□□ -0.94
CDC16YKL022C COQ8P27697 501 aa9.17□□□□□ -0.94
CDC16YKL022C SLD2P34252 453 aa9.16□□□□□ -0.94
CDC16YKL022C RTG3P38165 486 aa9.16□□□□□ -0.94
CDC16YKL022C ATG32P40458 529 aa9.16□□□□□ -0.94
CDC16YKL022C FAP1P53971 965 aa9.16□□□□□ -0.94
CDC16YKL022C SSA4P22202 642 aaKnown RBP9.16□□□□□ -0.94
CDC16YKL022C MET10P39692 1035 aa9.14□□□□□ -0.95
CDC16YKL022C YJL007CP47080 104 aa9.14□□□□□ -0.95
CDC16YKL022C BCH2P36122 765 aa9.13□□□□□ -0.95
CDC16YKL022C COX6P00427 148 aa9.12□□□□□ -0.95
CDC16YKL022C RRN6P32786 894 aa9.11□□□□□ -0.95
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms