Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CD40P25942 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.34■□□□□ 0.85
CD40P25942 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC20.34■□□□□ 0.85
CD40P25942 AC091060.1-201ENST00000623524 1766 ntBASIC20.34■□□□□ 0.85
CD40P25942 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.33■□□□□ 0.85
CD40P25942 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CD40P25942 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
CD40P25942 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.33■□□□□ 0.85
CD40P25942 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
CD40P25942 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
CD40P25942 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CD40P25942 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CD40P25942 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CD40P25942 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CD40P25942 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CD40P25942 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CD40P25942 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CD40P25942 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.32■□□□□ 0.84
CD40P25942 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CD40P25942 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CD40P25942 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CD40P25942 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CD40P25942 AC145676.1-201ENST00000514988 2004 ntBASIC20.31■□□□□ 0.84
CD40P25942 AC090877.2-201ENST00000558441 1738 ntBASIC20.31■□□□□ 0.84
CD40P25942 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CD40P25942 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.31■□□□□ 0.84
CD40P25942 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CD40P25942 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
CD40P25942 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.3■□□□□ 0.84
CD40P25942 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CD40P25942 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CD40P25942 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.3■□□□□ 0.84
CD40P25942 AC131212.1-201ENST00000613771 668 ntBASIC20.3■□□□□ 0.84
CD40P25942 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CD40P25942 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CD40P25942 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CD40P25942 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.29■□□□□ 0.84
CD40P25942 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.29■□□□□ 0.84
CD40P25942 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CD40P25942 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.29■□□□□ 0.84
CD40P25942 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CD40P25942 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CD40P25942 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CD40P25942 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.28■□□□□ 0.84
CD40P25942 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CD40P25942 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CD40P25942 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.28■□□□□ 0.84
CD40P25942 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.28■□□□□ 0.84
CD40P25942 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.28■□□□□ 0.84
CD40P25942 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.28■□□□□ 0.84
CD40P25942 UNC93B8-201ENST00000511903 705 ntBASIC20.28■□□□□ 0.84
CD40P25942 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.28■□□□□ 0.84
CD40P25942 AC092028.1-203ENST00000608262 953 ntBASIC20.28■□□□□ 0.84
CD40P25942 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CD40P25942 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CD40P25942 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.27■□□□□ 0.84
CD40P25942 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
CD40P25942 TSPY9P-201ENST00000440215 945 ntBASIC20.27■□□□□ 0.84
CD40P25942 TSPY11P-201ENST00000442607 1045 ntBASIC20.27■□□□□ 0.84
CD40P25942 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.27■□□□□ 0.84
CD40P25942 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
CD40P25942 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CD40P25942 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CD40P25942 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.26■□□□□ 0.83
CD40P25942 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CD40P25942 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.26■□□□□ 0.83
CD40P25942 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CD40P25942 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CD40P25942 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.26■□□□□ 0.83
CD40P25942 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CD40P25942 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.26■□□□□ 0.83
CD40P25942 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CD40P25942 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CD40P25942 KRT16P3-201ENST00000439127 1283 ntBASIC20.25■□□□□ 0.83
CD40P25942 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CD40P25942 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CD40P25942 AF131216.4-201ENST00000638924 1588 ntBASIC20.25■□□□□ 0.83
CD40P25942 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CD40P25942 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CD40P25942 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.24■□□□□ 0.83
CD40P25942 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.24■□□□□ 0.83
CD40P25942 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
CD40P25942 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.24■□□□□ 0.83
CD40P25942 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CD40P25942 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CD40P25942 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CD40P25942 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.23■□□□□ 0.83
CD40P25942 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.23■□□□□ 0.83
CD40P25942 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CD40P25942 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CD40P25942 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CD40P25942 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.23■□□□□ 0.83
CD40P25942 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CD40P25942 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CD40P25942 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
CD40P25942 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.22■□□□□ 0.83
CD40P25942 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.22■□□□□ 0.83
CD40P25942 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.22■□□□□ 0.83
CD40P25942 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.22■□□□□ 0.83
CD40P25942 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms