Protein–RNA interactions for Protein: P21580

TNFAIP3, Tumor necrosis factor alpha-induced protein 3, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3P21580 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC25.08■■□□□ 1.61
TNFAIP3P21580 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC25.08■■□□□ 1.61
TNFAIP3P21580 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
TNFAIP3P21580 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC25.08■■□□□ 1.6
TNFAIP3P21580 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
TNFAIP3P21580 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
TNFAIP3P21580 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC25.08■■□□□ 1.6
TNFAIP3P21580 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC25.07■■□□□ 1.6
TNFAIP3P21580 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC25.07■■□□□ 1.6
TNFAIP3P21580 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
TNFAIP3P21580 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC25.07■■□□□ 1.6
TNFAIP3P21580 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
TNFAIP3P21580 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
TNFAIP3P21580 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
TNFAIP3P21580 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
TNFAIP3P21580 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC25.06■■□□□ 1.6
TNFAIP3P21580 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC25.06■■□□□ 1.6
TNFAIP3P21580 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC25.06■■□□□ 1.6
TNFAIP3P21580 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC25.06■■□□□ 1.6
TNFAIP3P21580 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
TNFAIP3P21580 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
TNFAIP3P21580 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
TNFAIP3P21580 TMEM202-AS1-202ENST00000565181 2325 ntBASIC25.05■■□□□ 1.6
TNFAIP3P21580 AL592293.1-201ENST00000502889 1188 ntBASIC25.05■■□□□ 1.6
TNFAIP3P21580 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
TNFAIP3P21580 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
TNFAIP3P21580 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
TNFAIP3P21580 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
TNFAIP3P21580 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
TNFAIP3P21580 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
TNFAIP3P21580 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
TNFAIP3P21580 AC141586.4-201ENST00000624558 1573 ntBASIC25.04■■□□□ 1.6
TNFAIP3P21580 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
TNFAIP3P21580 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
TNFAIP3P21580 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC25.03■■□□□ 1.6
TNFAIP3P21580 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
TNFAIP3P21580 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
TNFAIP3P21580 HYI-213ENST00000583037 1322 ntTSL 5 BASIC25.03■■□□□ 1.6
TNFAIP3P21580 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC25.03■■□□□ 1.6
TNFAIP3P21580 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
TNFAIP3P21580 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
TNFAIP3P21580 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
TNFAIP3P21580 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
TNFAIP3P21580 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
TNFAIP3P21580 AC018755.3-202ENST00000596210 929 ntBASIC25.02■■□□□ 1.6
TNFAIP3P21580 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
TNFAIP3P21580 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC25.01■■□□□ 1.59
TNFAIP3P21580 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
TNFAIP3P21580 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
TNFAIP3P21580 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
TNFAIP3P21580 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
TNFAIP3P21580 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC25.01■■□□□ 1.59
TNFAIP3P21580 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
TNFAIP3P21580 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
TNFAIP3P21580 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
TNFAIP3P21580 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC25■■□□□ 1.59
TNFAIP3P21580 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC25■■□□□ 1.59
TNFAIP3P21580 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC25■■□□□ 1.59
TNFAIP3P21580 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
TNFAIP3P21580 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
TNFAIP3P21580 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
TNFAIP3P21580 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
TNFAIP3P21580 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC24.98■■□□□ 1.59
TNFAIP3P21580 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC24.98■■□□□ 1.59
TNFAIP3P21580 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
TNFAIP3P21580 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC24.98■■□□□ 1.59
TNFAIP3P21580 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
TNFAIP3P21580 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
TNFAIP3P21580 RARRES2P2-201ENST00000394842 485 ntBASIC24.98■■□□□ 1.59
TNFAIP3P21580 SPCS2P3-201ENST00000500401 656 ntBASIC24.98■■□□□ 1.59
TNFAIP3P21580 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
TNFAIP3P21580 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC24.98■■□□□ 1.59
TNFAIP3P21580 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
TNFAIP3P21580 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
TNFAIP3P21580 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC24.98■■□□□ 1.59
TNFAIP3P21580 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC24.98■■□□□ 1.59
TNFAIP3P21580 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC24.97■■□□□ 1.59
TNFAIP3P21580 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
TNFAIP3P21580 RPS2P7-201ENST00000447334 885 ntBASIC24.97■■□□□ 1.59
TNFAIP3P21580 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC24.97■■□□□ 1.59
TNFAIP3P21580 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC24.97■■□□□ 1.59
TNFAIP3P21580 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
TNFAIP3P21580 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC24.97■■□□□ 1.59
TNFAIP3P21580 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
TNFAIP3P21580 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
TNFAIP3P21580 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
TNFAIP3P21580 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC24.96■■□□□ 1.59
TNFAIP3P21580 HLA-L-211ENST00000482052 1765 ntBASIC24.96■■□□□ 1.59
TNFAIP3P21580 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
TNFAIP3P21580 HSD17B1P1-201ENST00000590052 955 ntBASIC24.96■■□□□ 1.59
TNFAIP3P21580 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC24.96■■□□□ 1.59
TNFAIP3P21580 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
TNFAIP3P21580 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC24.96■■□□□ 1.59
TNFAIP3P21580 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
TNFAIP3P21580 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.59
TNFAIP3P21580 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
TNFAIP3P21580 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
TNFAIP3P21580 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC24.95■■□□□ 1.58
TNFAIP3P21580 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
TNFAIP3P21580 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms