Protein–RNA interactions for Protein: P16403

HIST1H1C, Histone H1.2, humanhuman

Known RBP Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1CP16403 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HIST1H1CP16403 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.05■□□□□ 0.96
HIST1H1CP16403 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HIST1H1CP16403 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HIST1H1CP16403 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HIST1H1CP16403 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
HIST1H1CP16403 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.04■□□□□ 0.96
HIST1H1CP16403 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HIST1H1CP16403 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.03■□□□□ 0.96
HIST1H1CP16403 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
HIST1H1CP16403 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HIST1H1CP16403 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
HIST1H1CP16403 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC21.03■□□□□ 0.96
HIST1H1CP16403 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HIST1H1CP16403 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HIST1H1CP16403 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HIST1H1CP16403 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.02■□□□□ 0.96
HIST1H1CP16403 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HIST1H1CP16403 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.02■□□□□ 0.96
HIST1H1CP16403 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
HIST1H1CP16403 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HIST1H1CP16403 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.02■□□□□ 0.96
HIST1H1CP16403 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
HIST1H1CP16403 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
HIST1H1CP16403 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC21.02■□□□□ 0.96
HIST1H1CP16403 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
HIST1H1CP16403 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.01■□□□□ 0.95
HIST1H1CP16403 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
HIST1H1CP16403 FOXO3B-201ENST00000395675 1928 ntBASIC21.01■□□□□ 0.95
HIST1H1CP16403 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HIST1H1CP16403 AC004812.2-201ENST00000611079 2094 ntBASIC21.01■□□□□ 0.95
HIST1H1CP16403 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.01■□□□□ 0.95
HIST1H1CP16403 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HIST1H1CP16403 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HIST1H1CP16403 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HIST1H1CP16403 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HIST1H1CP16403 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HIST1H1CP16403 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
HIST1H1CP16403 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
HIST1H1CP16403 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HIST1H1CP16403 KRT18P10-201ENST00000388836 1287 ntBASIC20.99■□□□□ 0.95
HIST1H1CP16403 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
HIST1H1CP16403 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HIST1H1CP16403 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HIST1H1CP16403 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
HIST1H1CP16403 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
HIST1H1CP16403 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HIST1H1CP16403 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
HIST1H1CP16403 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HIST1H1CP16403 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.98■□□□□ 0.95
HIST1H1CP16403 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.98■□□□□ 0.95
HIST1H1CP16403 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.98■□□□□ 0.95
HIST1H1CP16403 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HIST1H1CP16403 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
HIST1H1CP16403 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HIST1H1CP16403 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HIST1H1CP16403 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HIST1H1CP16403 HLA-L-211ENST00000482052 1765 ntBASIC20.97■□□□□ 0.95
HIST1H1CP16403 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.97■□□□□ 0.95
HIST1H1CP16403 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HIST1H1CP16403 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.97■□□□□ 0.95
HIST1H1CP16403 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.97■□□□□ 0.95
HIST1H1CP16403 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HIST1H1CP16403 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HIST1H1CP16403 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HIST1H1CP16403 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HIST1H1CP16403 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
HIST1H1CP16403 AC009831.1-201ENST00000580420 1582 ntBASIC20.97■□□□□ 0.95
HIST1H1CP16403 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HIST1H1CP16403 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.97■□□□□ 0.95
HIST1H1CP16403 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HIST1H1CP16403 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HIST1H1CP16403 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HIST1H1CP16403 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HIST1H1CP16403 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
HIST1H1CP16403 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HIST1H1CP16403 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.96■□□□□ 0.95
HIST1H1CP16403 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HIST1H1CP16403 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HIST1H1CP16403 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HIST1H1CP16403 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HIST1H1CP16403 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
HIST1H1CP16403 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
HIST1H1CP16403 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HIST1H1CP16403 AC133552.2-201ENST00000619106 1032 ntBASIC20.95■□□□□ 0.94
HIST1H1CP16403 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
HIST1H1CP16403 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
HIST1H1CP16403 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HIST1H1CP16403 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
HIST1H1CP16403 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HIST1H1CP16403 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HIST1H1CP16403 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
HIST1H1CP16403 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HIST1H1CP16403 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.94■□□□□ 0.94
HIST1H1CP16403 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.94■□□□□ 0.94
HIST1H1CP16403 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HIST1H1CP16403 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.94■□□□□ 0.94
HIST1H1CP16403 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HIST1H1CP16403 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.94■□□□□ 0.94
HIST1H1CP16403 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms