Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HLA-DPB1P04440 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.99■□□□□ 0.95
HLA-DPB1P04440 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HLA-DPB1P04440 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
HLA-DPB1P04440 AL359504.2-201ENST00000605506 1601 ntBASIC20.99■□□□□ 0.95
HLA-DPB1P04440 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HLA-DPB1P04440 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.99■□□□□ 0.95
HLA-DPB1P04440 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HLA-DPB1P04440 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
HLA-DPB1P04440 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
HLA-DPB1P04440 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HLA-DPB1P04440 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HLA-DPB1P04440 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
HLA-DPB1P04440 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.97■□□□□ 0.95
HLA-DPB1P04440 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HLA-DPB1P04440 GPX1-201ENST00000419349 1106 ntBASIC20.97■□□□□ 0.95
HLA-DPB1P04440 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.97■□□□□ 0.95
HLA-DPB1P04440 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HLA-DPB1P04440 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HLA-DPB1P04440 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HLA-DPB1P04440 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HLA-DPB1P04440 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HLA-DPB1P04440 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HLA-DPB1P04440 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HLA-DPB1P04440 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HLA-DPB1P04440 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HLA-DPB1P04440 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
HLA-DPB1P04440 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HLA-DPB1P04440 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HLA-DPB1P04440 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HLA-DPB1P04440 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HLA-DPB1P04440 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
HLA-DPB1P04440 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.95■□□□□ 0.94
HLA-DPB1P04440 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.95■□□□□ 0.94
HLA-DPB1P04440 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
HLA-DPB1P04440 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.95■□□□□ 0.94
HLA-DPB1P04440 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HLA-DPB1P04440 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
HLA-DPB1P04440 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.94■□□□□ 0.94
HLA-DPB1P04440 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
HLA-DPB1P04440 AL157400.5-201ENST00000507624 621 ntBASIC20.94■□□□□ 0.94
HLA-DPB1P04440 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HLA-DPB1P04440 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
HLA-DPB1P04440 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HLA-DPB1P04440 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HLA-DPB1P04440 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.94■□□□□ 0.94
HLA-DPB1P04440 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
HLA-DPB1P04440 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
HLA-DPB1P04440 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.94■□□□□ 0.94
HLA-DPB1P04440 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.93■□□□□ 0.94
HLA-DPB1P04440 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
HLA-DPB1P04440 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HLA-DPB1P04440 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.93■□□□□ 0.94
HLA-DPB1P04440 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HLA-DPB1P04440 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.93■□□□□ 0.94
HLA-DPB1P04440 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
HLA-DPB1P04440 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HLA-DPB1P04440 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HLA-DPB1P04440 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.92■□□□□ 0.94
HLA-DPB1P04440 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HLA-DPB1P04440 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
HLA-DPB1P04440 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
HLA-DPB1P04440 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HLA-DPB1P04440 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HLA-DPB1P04440 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HLA-DPB1P04440 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HLA-DPB1P04440 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HLA-DPB1P04440 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HLA-DPB1P04440 AC092296.2-201ENST00000589470 999 ntBASIC20.91■□□□□ 0.94
HLA-DPB1P04440 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
HLA-DPB1P04440 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HLA-DPB1P04440 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.9■□□□□ 0.94
HLA-DPB1P04440 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HLA-DPB1P04440 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HLA-DPB1P04440 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.9■□□□□ 0.94
HLA-DPB1P04440 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
HLA-DPB1P04440 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
HLA-DPB1P04440 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
HLA-DPB1P04440 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
HLA-DPB1P04440 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
HLA-DPB1P04440 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
HLA-DPB1P04440 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.89■□□□□ 0.93
HLA-DPB1P04440 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.89■□□□□ 0.93
HLA-DPB1P04440 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.89■□□□□ 0.93
HLA-DPB1P04440 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.89■□□□□ 0.93
HLA-DPB1P04440 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HLA-DPB1P04440 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.93
HLA-DPB1P04440 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
HLA-DPB1P04440 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.89■□□□□ 0.93
HLA-DPB1P04440 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
HLA-DPB1P04440 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HLA-DPB1P04440 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HLA-DPB1P04440 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.88■□□□□ 0.93
HLA-DPB1P04440 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
HLA-DPB1P04440 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HLA-DPB1P04440 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.88■□□□□ 0.93
HLA-DPB1P04440 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
HLA-DPB1P04440 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HLA-DPB1P04440 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.87■□□□□ 0.93
HLA-DPB1P04440 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms