Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC26.81■■□□□ 1.88
HMGCRP04035 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC26.81■■□□□ 1.88
HMGCRP04035 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC26.81■■□□□ 1.88
HMGCRP04035 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
HMGCRP04035 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
HMGCRP04035 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
HMGCRP04035 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
HMGCRP04035 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
HMGCRP04035 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC26.79■■□□□ 1.88
HMGCRP04035 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC26.79■■□□□ 1.88
HMGCRP04035 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
HMGCRP04035 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
HMGCRP04035 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC26.78■■□□□ 1.88
HMGCRP04035 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
HMGCRP04035 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC26.78■■□□□ 1.88
HMGCRP04035 SNAI3-AS1-204ENST00000567997 2048 ntBASIC26.78■■□□□ 1.88
HMGCRP04035 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC26.77■■□□□ 1.88
HMGCRP04035 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
HMGCRP04035 EDA-201ENST00000338901 1233 ntBASIC26.77■■□□□ 1.88
HMGCRP04035 CLTA-206ENST00000466396 695 ntTSL 2 BASIC26.77■■□□□ 1.88
HMGCRP04035 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC26.77■■□□□ 1.88
HMGCRP04035 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC26.76■■□□□ 1.87
HMGCRP04035 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC26.76■■□□□ 1.87
HMGCRP04035 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC26.76■■□□□ 1.87
HMGCRP04035 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC26.76■■□□□ 1.87
HMGCRP04035 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC26.76■■□□□ 1.87
HMGCRP04035 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC26.76■■□□□ 1.87
HMGCRP04035 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.87
HMGCRP04035 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
HMGCRP04035 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
HMGCRP04035 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
HMGCRP04035 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC26.75■■□□□ 1.87
HMGCRP04035 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC26.75■■□□□ 1.87
HMGCRP04035 SNX5-217ENST00000606557 1087 ntBASIC26.75■■□□□ 1.87
HMGCRP04035 MIR6722-201ENST00000617286 78 ntBASIC26.75■■□□□ 1.87
HMGCRP04035 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC26.75■■□□□ 1.87
HMGCRP04035 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC26.75■■□□□ 1.87
HMGCRP04035 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
HMGCRP04035 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC26.74■■□□□ 1.87
HMGCRP04035 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
HMGCRP04035 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
HMGCRP04035 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC26.74■■□□□ 1.87
HMGCRP04035 AL355001.2-201ENST00000620617 1191 ntBASIC26.74■■□□□ 1.87
HMGCRP04035 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC26.74■■□□□ 1.87
HMGCRP04035 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
HMGCRP04035 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
HMGCRP04035 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC26.73■■□□□ 1.87
HMGCRP04035 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
HMGCRP04035 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC26.73■■□□□ 1.87
HMGCRP04035 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
HMGCRP04035 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC26.73■■□□□ 1.87
HMGCRP04035 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC26.73■■□□□ 1.87
HMGCRP04035 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
HMGCRP04035 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC26.72■■□□□ 1.87
HMGCRP04035 HYI-206ENST00000372434 1025 ntTSL 5 BASIC26.72■■□□□ 1.87
HMGCRP04035 SRD5A1P1-201ENST00000442297 786 ntBASIC26.72■■□□□ 1.87
HMGCRP04035 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC26.72■■□□□ 1.87
HMGCRP04035 AC024257.2-201ENST00000549699 147 ntBASIC26.72■■□□□ 1.87
HMGCRP04035 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC26.72■■□□□ 1.87
HMGCRP04035 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
HMGCRP04035 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC26.71■■□□□ 1.87
HMGCRP04035 AP004609.3-201ENST00000610705 1884 ntBASIC26.71■■□□□ 1.87
HMGCRP04035 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
HMGCRP04035 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
HMGCRP04035 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
HMGCRP04035 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC26.71■■□□□ 1.87
HMGCRP04035 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC26.7■■□□□ 1.87
HMGCRP04035 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
HMGCRP04035 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
HMGCRP04035 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC26.7■■□□□ 1.86
HMGCRP04035 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
HMGCRP04035 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC26.69■■□□□ 1.86
HMGCRP04035 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC26.69■■□□□ 1.86
HMGCRP04035 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
HMGCRP04035 AC105265.2-201ENST00000467189 838 ntBASIC26.69■■□□□ 1.86
HMGCRP04035 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
HMGCRP04035 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
HMGCRP04035 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
HMGCRP04035 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC26.68■■□□□ 1.86
HMGCRP04035 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC26.68■■□□□ 1.86
HMGCRP04035 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
HMGCRP04035 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
HMGCRP04035 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
HMGCRP04035 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
HMGCRP04035 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC26.67■■□□□ 1.86
HMGCRP04035 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
HMGCRP04035 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC26.66■■□□□ 1.86
HMGCRP04035 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC26.66■■□□□ 1.86
HMGCRP04035 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
HMGCRP04035 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
HMGCRP04035 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC26.65■■□□□ 1.86
HMGCRP04035 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
HMGCRP04035 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
HMGCRP04035 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC26.64■■□□□ 1.86
HMGCRP04035 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC26.64■■□□□ 1.86
HMGCRP04035 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.86
HMGCRP04035 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
HMGCRP04035 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC26.63■■□□□ 1.85
HMGCRP04035 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
HMGCRP04035 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms