Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
GGPS1O95749 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
GGPS1O95749 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
GGPS1O95749 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
GGPS1O95749 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
GGPS1O95749 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC26.53■■□□□ 1.84
GGPS1O95749 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
GGPS1O95749 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
GGPS1O95749 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
GGPS1O95749 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
GGPS1O95749 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC26.52■■□□□ 1.84
GGPS1O95749 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC26.51■■□□□ 1.84
GGPS1O95749 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
GGPS1O95749 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC26.51■■□□□ 1.83
GGPS1O95749 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
GGPS1O95749 SENP5-202ENST00000419026 973 ntTSL 3 BASIC26.5■■□□□ 1.83
GGPS1O95749 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
GGPS1O95749 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
GGPS1O95749 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
GGPS1O95749 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC26.49■■□□□ 1.83
GGPS1O95749 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
GGPS1O95749 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
GGPS1O95749 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC26.49■■□□□ 1.83
GGPS1O95749 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC26.49■■□□□ 1.83
GGPS1O95749 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC26.49■■□□□ 1.83
GGPS1O95749 SHF-207ENST00000560540 2062 ntTSL 5 BASIC26.49■■□□□ 1.83
GGPS1O95749 AC092803.2-201ENST00000564287 1899 ntBASIC26.49■■□□□ 1.83
GGPS1O95749 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
GGPS1O95749 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
GGPS1O95749 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
GGPS1O95749 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
GGPS1O95749 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC26.48■■□□□ 1.83
GGPS1O95749 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC26.48■■□□□ 1.83
GGPS1O95749 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC26.48■■□□□ 1.83
GGPS1O95749 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
GGPS1O95749 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
GGPS1O95749 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
GGPS1O95749 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
GGPS1O95749 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC26.47■■□□□ 1.83
GGPS1O95749 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
GGPS1O95749 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC26.47■■□□□ 1.83
GGPS1O95749 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC26.46■■□□□ 1.83
GGPS1O95749 AF131216.4-201ENST00000638924 1588 ntBASIC26.46■■□□□ 1.83
GGPS1O95749 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
GGPS1O95749 TK2-202ENST00000417693 1046 ntTSL 2 BASIC26.46■■□□□ 1.83
GGPS1O95749 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC26.46■■□□□ 1.83
GGPS1O95749 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
GGPS1O95749 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
GGPS1O95749 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
GGPS1O95749 AC008406.3-201ENST00000620001 1374 ntBASIC26.46■■□□□ 1.83
GGPS1O95749 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC26.45■■□□□ 1.83
GGPS1O95749 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
GGPS1O95749 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC26.45■■□□□ 1.82
GGPS1O95749 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC26.45■■□□□ 1.82
GGPS1O95749 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC26.45■■□□□ 1.82
GGPS1O95749 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
GGPS1O95749 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
GGPS1O95749 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
GGPS1O95749 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC26.44■■□□□ 1.82
GGPS1O95749 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC26.44■■□□□ 1.82
GGPS1O95749 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC26.44■■□□□ 1.82
GGPS1O95749 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC26.44■■□□□ 1.82
GGPS1O95749 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
GGPS1O95749 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
GGPS1O95749 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC26.43■■□□□ 1.82
GGPS1O95749 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC26.43■■□□□ 1.82
GGPS1O95749 AC090877.2-201ENST00000558441 1738 ntBASIC26.43■■□□□ 1.82
GGPS1O95749 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC26.43■■□□□ 1.82
GGPS1O95749 AC010997.5-201ENST00000609182 354 ntBASIC26.43■■□□□ 1.82
GGPS1O95749 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC26.43■■□□□ 1.82
GGPS1O95749 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC26.43■■□□□ 1.82
GGPS1O95749 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
GGPS1O95749 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC26.42■■□□□ 1.82
GGPS1O95749 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC26.42■■□□□ 1.82
GGPS1O95749 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC26.42■■□□□ 1.82
GGPS1O95749 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC26.42■■□□□ 1.82
GGPS1O95749 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC26.41■■□□□ 1.82
GGPS1O95749 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC26.41■■□□□ 1.82
GGPS1O95749 MTDHP2-201ENST00000601468 714 ntBASIC26.41■■□□□ 1.82
GGPS1O95749 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC26.41■■□□□ 1.82
GGPS1O95749 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
GGPS1O95749 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC26.4■■□□□ 1.82
GGPS1O95749 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
GGPS1O95749 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
GGPS1O95749 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
GGPS1O95749 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC26.4■■□□□ 1.82
GGPS1O95749 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
GGPS1O95749 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
GGPS1O95749 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC26.39■■□□□ 1.82
GGPS1O95749 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC26.39■■□□□ 1.82
GGPS1O95749 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
GGPS1O95749 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
GGPS1O95749 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
GGPS1O95749 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
GGPS1O95749 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC26.38■■□□□ 1.81
GGPS1O95749 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC26.38■■□□□ 1.81
GGPS1O95749 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC26.38■■□□□ 1.81
GGPS1O95749 LSM4-201ENST00000252816 986 ntTSL 2 BASIC26.37■■□□□ 1.81
GGPS1O95749 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC26.37■■□□□ 1.81
GGPS1O95749 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC26.37■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms