Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
RTN3O95197 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
RTN3O95197 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC24.76■■□□□ 1.55
RTN3O95197 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC24.76■■□□□ 1.55
RTN3O95197 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC24.75■■□□□ 1.55
RTN3O95197 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
RTN3O95197 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC24.75■■□□□ 1.55
RTN3O95197 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
RTN3O95197 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC24.75■■□□□ 1.55
RTN3O95197 MIR4281-201ENST00000580852 62 ntBASIC24.75■■□□□ 1.55
RTN3O95197 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC24.75■■□□□ 1.55
RTN3O95197 AC137630.3-201ENST00000607245 391 ntBASIC24.75■■□□□ 1.55
RTN3O95197 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC24.75■■□□□ 1.55
RTN3O95197 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
RTN3O95197 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC24.75■■□□□ 1.55
RTN3O95197 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC24.75■■□□□ 1.55
RTN3O95197 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
RTN3O95197 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
RTN3O95197 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC24.74■■□□□ 1.55
RTN3O95197 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
RTN3O95197 GUSBP5-201ENST00000418136 578 ntBASIC24.74■■□□□ 1.55
RTN3O95197 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC24.74■■□□□ 1.55
RTN3O95197 KRT125P-201ENST00000546827 989 ntBASIC24.74■■□□□ 1.55
RTN3O95197 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC24.74■■□□□ 1.55
RTN3O95197 GAK-223ENST00000628912 497 ntTSL 5 BASIC24.74■■□□□ 1.55
RTN3O95197 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
RTN3O95197 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
RTN3O95197 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
RTN3O95197 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
RTN3O95197 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
RTN3O95197 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
RTN3O95197 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC24.72■■□□□ 1.55
RTN3O95197 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
RTN3O95197 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
RTN3O95197 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC24.72■■□□□ 1.55
RTN3O95197 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC24.72■■□□□ 1.55
RTN3O95197 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
RTN3O95197 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC24.72■■□□□ 1.55
RTN3O95197 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
RTN3O95197 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
RTN3O95197 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
RTN3O95197 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
RTN3O95197 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
RTN3O95197 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
RTN3O95197 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC24.71■■□□□ 1.55
RTN3O95197 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
RTN3O95197 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
RTN3O95197 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
RTN3O95197 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
RTN3O95197 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
RTN3O95197 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC24.7■■□□□ 1.54
RTN3O95197 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
RTN3O95197 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC24.7■■□□□ 1.54
RTN3O95197 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
RTN3O95197 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC24.69■■□□□ 1.54
RTN3O95197 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
RTN3O95197 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
RTN3O95197 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
RTN3O95197 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC24.69■■□□□ 1.54
RTN3O95197 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
RTN3O95197 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
RTN3O95197 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC24.68■■□□□ 1.54
RTN3O95197 MIR4787-201ENST00000607364 84 ntBASIC24.68■■□□□ 1.54
RTN3O95197 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC24.68■■□□□ 1.54
RTN3O95197 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
RTN3O95197 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
RTN3O95197 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
RTN3O95197 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC24.67■■□□□ 1.54
RTN3O95197 AC090877.2-201ENST00000558441 1738 ntBASIC24.67■■□□□ 1.54
RTN3O95197 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC24.67■■□□□ 1.54
RTN3O95197 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
RTN3O95197 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
RTN3O95197 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC24.67■■□□□ 1.54
RTN3O95197 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
RTN3O95197 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
RTN3O95197 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC24.66■■□□□ 1.54
RTN3O95197 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
RTN3O95197 AC021242.3-201ENST00000607598 1377 ntBASIC24.66■■□□□ 1.54
RTN3O95197 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC24.65■■□□□ 1.54
RTN3O95197 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC24.65■■□□□ 1.54
RTN3O95197 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
RTN3O95197 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC24.65■■□□□ 1.54
RTN3O95197 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC24.65■■□□□ 1.54
RTN3O95197 LTK-203ENST00000453182 2412 ntTSL 2 BASIC24.65■■□□□ 1.54
RTN3O95197 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RTN3O95197 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
RTN3O95197 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC24.64■■□□□ 1.54
RTN3O95197 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.54
RTN3O95197 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
RTN3O95197 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC24.64■■□□□ 1.54
RTN3O95197 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
RTN3O95197 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
RTN3O95197 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RTN3O95197 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
RTN3O95197 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RTN3O95197 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC24.63■■□□□ 1.53
RTN3O95197 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC24.63■■□□□ 1.53
RTN3O95197 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC24.63■■□□□ 1.53
RTN3O95197 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
RTN3O95197 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms