Protein–RNA interactions for Protein: O60906

SMPD2, Sphingomyelin phosphodiesterase 2, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD2O60906 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.53■□□□□ 0.88
SMPD2O60906 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
SMPD2O60906 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SMPD2O60906 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMPD2O60906 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMPD2O60906 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SMPD2O60906 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMPD2O60906 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMPD2O60906 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SMPD2O60906 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.52■□□□□ 0.88
SMPD2O60906 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.52■□□□□ 0.88
SMPD2O60906 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMPD2O60906 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMPD2O60906 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMPD2O60906 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.51■□□□□ 0.87
SMPD2O60906 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMPD2O60906 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.51■□□□□ 0.87
SMPD2O60906 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.51■□□□□ 0.87
SMPD2O60906 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.51■□□□□ 0.87
SMPD2O60906 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMPD2O60906 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
SMPD2O60906 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
SMPD2O60906 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMPD2O60906 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMPD2O60906 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.5■□□□□ 0.87
SMPD2O60906 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SMPD2O60906 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMPD2O60906 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
SMPD2O60906 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMPD2O60906 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMPD2O60906 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
SMPD2O60906 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMPD2O60906 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SMPD2O60906 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.49■□□□□ 0.87
SMPD2O60906 UNC93B8-201ENST00000511903 705 ntBASIC20.49■□□□□ 0.87
SMPD2O60906 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.49■□□□□ 0.87
SMPD2O60906 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMPD2O60906 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.49■□□□□ 0.87
SMPD2O60906 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMPD2O60906 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
SMPD2O60906 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SMPD2O60906 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.48■□□□□ 0.87
SMPD2O60906 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.48■□□□□ 0.87
SMPD2O60906 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMPD2O60906 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMPD2O60906 KRT18P24-201ENST00000344739 1156 ntBASIC20.48■□□□□ 0.87
SMPD2O60906 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.48■□□□□ 0.87
SMPD2O60906 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMPD2O60906 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.48■□□□□ 0.87
SMPD2O60906 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SMPD2O60906 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.48■□□□□ 0.87
SMPD2O60906 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMPD2O60906 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SMPD2O60906 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SMPD2O60906 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
SMPD2O60906 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SMPD2O60906 TSPY9P-201ENST00000440215 945 ntBASIC20.47■□□□□ 0.87
SMPD2O60906 TSPY11P-201ENST00000442607 1045 ntBASIC20.47■□□□□ 0.87
SMPD2O60906 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.47■□□□□ 0.87
SMPD2O60906 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
SMPD2O60906 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SMPD2O60906 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SMPD2O60906 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
SMPD2O60906 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SMPD2O60906 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
SMPD2O60906 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SMPD2O60906 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.46■□□□□ 0.87
SMPD2O60906 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SMPD2O60906 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
SMPD2O60906 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SMPD2O60906 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SMPD2O60906 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
SMPD2O60906 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.45■□□□□ 0.86
SMPD2O60906 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.45■□□□□ 0.86
SMPD2O60906 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.45■□□□□ 0.86
SMPD2O60906 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
SMPD2O60906 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SMPD2O60906 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SMPD2O60906 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.44■□□□□ 0.86
SMPD2O60906 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.44■□□□□ 0.86
SMPD2O60906 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
SMPD2O60906 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SMPD2O60906 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMPD2O60906 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.43■□□□□ 0.86
SMPD2O60906 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
SMPD2O60906 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMPD2O60906 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMPD2O60906 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMPD2O60906 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SMPD2O60906 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMPD2O60906 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.42■□□□□ 0.86
SMPD2O60906 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.42■□□□□ 0.86
SMPD2O60906 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.42■□□□□ 0.86
SMPD2O60906 AC137630.3-201ENST00000607245 391 ntBASIC20.42■□□□□ 0.86
SMPD2O60906 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SMPD2O60906 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SMPD2O60906 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SMPD2O60906 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMPD2O60906 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMPD2O60906 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms