Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
CCNT1O60563 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
CCNT1O60563 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC26.76■■□□□ 1.87
CCNT1O60563 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
CCNT1O60563 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC26.75■■□□□ 1.87
CCNT1O60563 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC26.75■■□□□ 1.87
CCNT1O60563 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC26.75■■□□□ 1.87
CCNT1O60563 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC26.75■■□□□ 1.87
CCNT1O60563 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC26.75■■□□□ 1.87
CCNT1O60563 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC26.75■■□□□ 1.87
CCNT1O60563 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
CCNT1O60563 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
CCNT1O60563 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC26.74■■□□□ 1.87
CCNT1O60563 MED17-227ENST00000640521 2047 ntTSL 5 BASIC26.74■■□□□ 1.87
CCNT1O60563 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC26.74■■□□□ 1.87
CCNT1O60563 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
CCNT1O60563 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
CCNT1O60563 AC142381.3-201ENST00000568208 1670 ntBASIC26.73■■□□□ 1.87
CCNT1O60563 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
CCNT1O60563 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC26.73■■□□□ 1.87
CCNT1O60563 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC26.73■■□□□ 1.87
CCNT1O60563 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC26.73■■□□□ 1.87
CCNT1O60563 AC138932.3-201ENST00000567634 1902 ntBASIC26.73■■□□□ 1.87
CCNT1O60563 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
CCNT1O60563 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
CCNT1O60563 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC26.72■■□□□ 1.87
CCNT1O60563 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
CCNT1O60563 AC103834.1-201ENST00000520383 144 ntBASIC26.72■■□□□ 1.87
CCNT1O60563 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC26.72■■□□□ 1.87
CCNT1O60563 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC26.72■■□□□ 1.87
CCNT1O60563 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
CCNT1O60563 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
CCNT1O60563 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
CCNT1O60563 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC26.71■■□□□ 1.87
CCNT1O60563 AC022616.5-201ENST00000518796 181 ntBASIC26.71■■□□□ 1.87
CCNT1O60563 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
CCNT1O60563 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
CCNT1O60563 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
CCNT1O60563 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
CCNT1O60563 MIR4508-201ENST00000584178 70 ntBASIC26.7■■□□□ 1.86
CCNT1O60563 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC26.7■■□□□ 1.86
CCNT1O60563 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC26.7■■□□□ 1.86
CCNT1O60563 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC26.7■■□□□ 1.86
CCNT1O60563 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC26.69■■□□□ 1.86
CCNT1O60563 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
CCNT1O60563 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC26.69■■□□□ 1.86
CCNT1O60563 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC26.69■■□□□ 1.86
CCNT1O60563 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC26.69■■□□□ 1.86
CCNT1O60563 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC26.69■■□□□ 1.86
CCNT1O60563 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC26.68■■□□□ 1.86
CCNT1O60563 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC26.68■■□□□ 1.86
CCNT1O60563 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CCNT1O60563 YBX1P4-201ENST00000392794 808 ntBASIC26.68■■□□□ 1.86
CCNT1O60563 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CCNT1O60563 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC26.67■■□□□ 1.86
CCNT1O60563 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC26.67■■□□□ 1.86
CCNT1O60563 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CCNT1O60563 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC26.67■■□□□ 1.86
CCNT1O60563 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC26.67■■□□□ 1.86
CCNT1O60563 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC26.67■■□□□ 1.86
CCNT1O60563 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
CCNT1O60563 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC26.67■■□□□ 1.86
CCNT1O60563 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC26.67■■□□□ 1.86
CCNT1O60563 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC26.66■■□□□ 1.86
CCNT1O60563 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
CCNT1O60563 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CCNT1O60563 MIR6089-201ENST00000616698 64 ntBASIC26.65■■□□□ 1.86
CCNT1O60563 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
CCNT1O60563 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC26.65■■□□□ 1.86
CCNT1O60563 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CCNT1O60563 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
CCNT1O60563 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
CCNT1O60563 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC26.64■■□□□ 1.86
CCNT1O60563 SSSCA1-AS1-201ENST00000567594 614 ntBASIC26.64■■□□□ 1.86
CCNT1O60563 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC26.64■■□□□ 1.86
CCNT1O60563 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC26.63■■□□□ 1.85
CCNT1O60563 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC26.63■■□□□ 1.85
CCNT1O60563 LSR-205ENST00000427250 1606 ntTSL 2 BASIC26.63■■□□□ 1.85
CCNT1O60563 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC26.63■■□□□ 1.85
CCNT1O60563 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CCNT1O60563 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC26.63■■□□□ 1.85
CCNT1O60563 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC26.63■■□□□ 1.85
CCNT1O60563 AC090877.2-201ENST00000558441 1738 ntBASIC26.62■■□□□ 1.85
CCNT1O60563 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
CCNT1O60563 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
CCNT1O60563 RARRES2P1-201ENST00000474487 481 ntBASIC26.62■■□□□ 1.85
CCNT1O60563 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
CCNT1O60563 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
CCNT1O60563 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CCNT1O60563 AC103724.3-201ENST00000564481 992 ntBASIC26.61■■□□□ 1.85
CCNT1O60563 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC26.61■■□□□ 1.85
CCNT1O60563 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
CCNT1O60563 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
CCNT1O60563 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC26.61■■□□□ 1.85
CCNT1O60563 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC26.61■■□□□ 1.85
CCNT1O60563 AP003733.4-201ENST00000623785 1697 ntBASIC26.6■■□□□ 1.85
CCNT1O60563 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CCNT1O60563 AC120024.1-201ENST00000562672 995 ntBASIC26.6■■□□□ 1.85
CCNT1O60563 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
CCNT1O60563 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 9.1 ms