Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
SSNA1O43805 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SSNA1O43805 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.96■□□□□ 0.79
SSNA1O43805 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SSNA1O43805 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SSNA1O43805 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SSNA1O43805 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.95■□□□□ 0.78
SSNA1O43805 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSNA1O43805 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.95■□□□□ 0.78
SSNA1O43805 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSNA1O43805 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSNA1O43805 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSNA1O43805 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.95■□□□□ 0.78
SSNA1O43805 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SSNA1O43805 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.94■□□□□ 0.78
SSNA1O43805 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
SSNA1O43805 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SSNA1O43805 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC19.94■□□□□ 0.78
SSNA1O43805 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
SSNA1O43805 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SSNA1O43805 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC19.94■□□□□ 0.78
SSNA1O43805 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SSNA1O43805 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
SSNA1O43805 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
SSNA1O43805 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
SSNA1O43805 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SSNA1O43805 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.94■□□□□ 0.78
SSNA1O43805 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC19.93■□□□□ 0.78
SSNA1O43805 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SSNA1O43805 AC004812.2-201ENST00000611079 2094 ntBASIC19.93■□□□□ 0.78
SSNA1O43805 EP400NL-214ENST00000641289 2402 ntBASIC19.93■□□□□ 0.78
SSNA1O43805 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SSNA1O43805 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SSNA1O43805 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SSNA1O43805 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
SSNA1O43805 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SSNA1O43805 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC19.92■□□□□ 0.78
SSNA1O43805 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SSNA1O43805 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SSNA1O43805 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
SSNA1O43805 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
SSNA1O43805 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SSNA1O43805 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
SSNA1O43805 LINC00273-201ENST00000539813 1452 ntBASIC19.92■□□□□ 0.78
SSNA1O43805 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
SSNA1O43805 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC19.91■□□□□ 0.78
SSNA1O43805 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SSNA1O43805 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SSNA1O43805 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SSNA1O43805 AC233723.2-201ENST00000623798 2106 ntBASIC19.91■□□□□ 0.78
SSNA1O43805 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SSNA1O43805 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC19.91■□□□□ 0.78
SSNA1O43805 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.9■□□□□ 0.78
SSNA1O43805 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
SSNA1O43805 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SSNA1O43805 AL024507.2-201ENST00000606070 2574 ntBASIC19.9■□□□□ 0.78
SSNA1O43805 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SSNA1O43805 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
SSNA1O43805 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SSNA1O43805 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SSNA1O43805 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SSNA1O43805 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SSNA1O43805 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SSNA1O43805 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
SSNA1O43805 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
SSNA1O43805 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SSNA1O43805 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SSNA1O43805 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
SSNA1O43805 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SSNA1O43805 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.89■□□□□ 0.77
SSNA1O43805 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SSNA1O43805 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.89■□□□□ 0.77
SSNA1O43805 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SSNA1O43805 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SSNA1O43805 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.88■□□□□ 0.77
SSNA1O43805 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SSNA1O43805 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC19.88■□□□□ 0.77
SSNA1O43805 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC19.88■□□□□ 0.77
SSNA1O43805 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SSNA1O43805 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SSNA1O43805 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
SSNA1O43805 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SSNA1O43805 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SSNA1O43805 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SSNA1O43805 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SSNA1O43805 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SSNA1O43805 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SSNA1O43805 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.87■□□□□ 0.77
SSNA1O43805 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
SSNA1O43805 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SSNA1O43805 SLC6A10P-202ENST00000431994 2058 ntBASIC19.87■□□□□ 0.77
SSNA1O43805 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
SSNA1O43805 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SSNA1O43805 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.86■□□□□ 0.77
SSNA1O43805 EI24-212ENST00000615917 1407 ntTSL 2 BASIC19.86■□□□□ 0.77
SSNA1O43805 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SSNA1O43805 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.86■□□□□ 0.77
SSNA1O43805 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SSNA1O43805 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.86■□□□□ 0.77
SSNA1O43805 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms