Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
XRCC2O43543 AC087393.1-201ENST00000582896 145 ntBASIC20.32■□□□□ 0.84
XRCC2O43543 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
XRCC2O43543 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.32■□□□□ 0.84
XRCC2O43543 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.32■□□□□ 0.84
XRCC2O43543 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
XRCC2O43543 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.32■□□□□ 0.84
XRCC2O43543 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
XRCC2O43543 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.31■□□□□ 0.84
XRCC2O43543 AC129492.7-201ENST00000622992 756 ntBASIC20.31■□□□□ 0.84
XRCC2O43543 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
XRCC2O43543 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
XRCC2O43543 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
XRCC2O43543 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
XRCC2O43543 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
XRCC2O43543 KRT18P60-201ENST00000312876 1297 ntBASIC20.3■□□□□ 0.84
XRCC2O43543 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.3■□□□□ 0.84
XRCC2O43543 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
XRCC2O43543 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.3■□□□□ 0.84
XRCC2O43543 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.3■□□□□ 0.84
XRCC2O43543 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
XRCC2O43543 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
XRCC2O43543 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
XRCC2O43543 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
XRCC2O43543 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
XRCC2O43543 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
XRCC2O43543 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
XRCC2O43543 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.29■□□□□ 0.84
XRCC2O43543 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
XRCC2O43543 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.29■□□□□ 0.84
XRCC2O43543 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.29■□□□□ 0.84
XRCC2O43543 NTF6A-201ENST00000591175 560 ntBASIC20.29■□□□□ 0.84
XRCC2O43543 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
XRCC2O43543 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
XRCC2O43543 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.29■□□□□ 0.84
XRCC2O43543 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
XRCC2O43543 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
XRCC2O43543 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.28■□□□□ 0.84
XRCC2O43543 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
XRCC2O43543 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
XRCC2O43543 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
XRCC2O43543 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
XRCC2O43543 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
XRCC2O43543 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
XRCC2O43543 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.27■□□□□ 0.84
XRCC2O43543 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.27■□□□□ 0.84
XRCC2O43543 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
XRCC2O43543 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
XRCC2O43543 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
XRCC2O43543 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
XRCC2O43543 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
XRCC2O43543 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
XRCC2O43543 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
XRCC2O43543 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
XRCC2O43543 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.26■□□□□ 0.83
XRCC2O43543 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
XRCC2O43543 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
XRCC2O43543 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
XRCC2O43543 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.25■□□□□ 0.83
XRCC2O43543 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
XRCC2O43543 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
XRCC2O43543 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
XRCC2O43543 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
XRCC2O43543 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
XRCC2O43543 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
XRCC2O43543 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
XRCC2O43543 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
XRCC2O43543 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
XRCC2O43543 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
XRCC2O43543 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.24■□□□□ 0.83
XRCC2O43543 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
XRCC2O43543 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
XRCC2O43543 AL592295.1-201ENST00000400984 884 ntBASIC20.24■□□□□ 0.83
XRCC2O43543 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
XRCC2O43543 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.23■□□□□ 0.83
XRCC2O43543 LINC01124-201ENST00000409786 2117 ntBASIC20.23■□□□□ 0.83
XRCC2O43543 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
XRCC2O43543 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
XRCC2O43543 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
XRCC2O43543 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
XRCC2O43543 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
XRCC2O43543 AC141586.4-201ENST00000624558 1573 ntBASIC20.23■□□□□ 0.83
XRCC2O43543 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.23■□□□□ 0.83
XRCC2O43543 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
XRCC2O43543 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
XRCC2O43543 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
XRCC2O43543 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
XRCC2O43543 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
XRCC2O43543 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
XRCC2O43543 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
XRCC2O43543 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.22■□□□□ 0.83
XRCC2O43543 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
XRCC2O43543 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
XRCC2O43543 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
XRCC2O43543 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
XRCC2O43543 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
XRCC2O43543 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
XRCC2O43543 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
XRCC2O43543 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.21■□□□□ 0.83
XRCC2O43543 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms