Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDH17O14917 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PCDH17O14917 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDH17O14917 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDH17O14917 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
PCDH17O14917 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PCDH17O14917 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC22.31■■□□□ 1.16
PCDH17O14917 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PCDH17O14917 AC142381.3-201ENST00000568208 1670 ntBASIC22.3■■□□□ 1.16
PCDH17O14917 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC22.3■■□□□ 1.16
PCDH17O14917 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PCDH17O14917 AL592295.1-201ENST00000400984 884 ntBASIC22.3■■□□□ 1.16
PCDH17O14917 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDH17O14917 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PCDH17O14917 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC22.3■■□□□ 1.16
PCDH17O14917 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PCDH17O14917 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
PCDH17O14917 KRT18P24-201ENST00000344739 1156 ntBASIC22.29■■□□□ 1.16
PCDH17O14917 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PCDH17O14917 AC009299.2-201ENST00000482477 511 ntBASIC22.29■■□□□ 1.16
PCDH17O14917 TK2-216ENST00000564917 1156 ntTSL 3 BASIC22.29■■□□□ 1.16
PCDH17O14917 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PCDH17O14917 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
PCDH17O14917 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDH17O14917 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
PCDH17O14917 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PCDH17O14917 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
PCDH17O14917 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC22.29■■□□□ 1.16
PCDH17O14917 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDH17O14917 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDH17O14917 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
PCDH17O14917 AC022211.4-201ENST00000625094 2161 ntBASIC22.28■■□□□ 1.16
PCDH17O14917 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDH17O14917 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDH17O14917 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDH17O14917 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDH17O14917 PRTG-204ENST00000561292 833 ntTSL 3 BASIC22.27■■□□□ 1.16
PCDH17O14917 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDH17O14917 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDH17O14917 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDH17O14917 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
PCDH17O14917 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PCDH17O14917 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDH17O14917 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC22.26■■□□□ 1.15
PCDH17O14917 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
PCDH17O14917 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDH17O14917 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PCDH17O14917 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC22.26■■□□□ 1.15
PCDH17O14917 AC138932.3-201ENST00000567634 1902 ntBASIC22.25■■□□□ 1.15
PCDH17O14917 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDH17O14917 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDH17O14917 AC096887.2-201ENST00000623443 1957 ntBASIC22.25■■□□□ 1.15
PCDH17O14917 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDH17O14917 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC22.25■■□□□ 1.15
PCDH17O14917 Z92544.1-202ENST00000571933 1220 ntBASIC22.25■■□□□ 1.15
PCDH17O14917 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC22.25■■□□□ 1.15
PCDH17O14917 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDH17O14917 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
PCDH17O14917 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDH17O14917 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PCDH17O14917 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC22.24■■□□□ 1.15
PCDH17O14917 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDH17O14917 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC22.24■■□□□ 1.15
PCDH17O14917 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PCDH17O14917 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PCDH17O14917 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDH17O14917 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDH17O14917 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
PCDH17O14917 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC22.24■■□□□ 1.15
PCDH17O14917 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDH17O14917 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC22.23■■□□□ 1.15
PCDH17O14917 HES6-204ENST00000409182 863 ntTSL 2 BASIC22.23■■□□□ 1.15
PCDH17O14917 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
PCDH17O14917 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC22.23■■□□□ 1.15
PCDH17O14917 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDH17O14917 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PCDH17O14917 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC22.23■■□□□ 1.15
PCDH17O14917 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC22.23■■□□□ 1.15
PCDH17O14917 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDH17O14917 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDH17O14917 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.22■■□□□ 1.15
PCDH17O14917 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
PCDH17O14917 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC22.22■■□□□ 1.15
PCDH17O14917 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDH17O14917 THA1P-201ENST00000590384 1145 ntBASIC22.22■■□□□ 1.15
PCDH17O14917 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDH17O14917 THRA-202ENST00000394121 2260 ntTSL 2 BASIC22.21■■□□□ 1.15
PCDH17O14917 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC22.21■■□□□ 1.15
PCDH17O14917 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDH17O14917 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
PCDH17O14917 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDH17O14917 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC22.21■■□□□ 1.15
PCDH17O14917 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDH17O14917 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDH17O14917 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC22.21■■□□□ 1.15
PCDH17O14917 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
PCDH17O14917 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC22.2■■□□□ 1.14
PCDH17O14917 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PCDH17O14917 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC22.2■■□□□ 1.14
PCDH17O14917 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms