Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
NDUFA4O00483 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
NDUFA4O00483 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
NDUFA4O00483 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC18.01■□□□□ 0.47
NDUFA4O00483 EED-207ENST00000528180 1745 ntTSL 5 BASIC18.01■□□□□ 0.47
NDUFA4O00483 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
NDUFA4O00483 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NDUFA4O00483 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
NDUFA4O00483 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NDUFA4O00483 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NDUFA4O00483 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC18.01■□□□□ 0.47
NDUFA4O00483 BHLHE23-202ENST00000612929 1109 ntBASIC18.01■□□□□ 0.47
NDUFA4O00483 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
NDUFA4O00483 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NDUFA4O00483 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC18.01■□□□□ 0.47
NDUFA4O00483 LSR-205ENST00000427250 1606 ntTSL 2 BASIC18.01■□□□□ 0.47
NDUFA4O00483 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC18■□□□□ 0.47
NDUFA4O00483 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
NDUFA4O00483 SSSCA1-AS1-201ENST00000567594 614 ntBASIC18■□□□□ 0.47
NDUFA4O00483 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC18■□□□□ 0.47
NDUFA4O00483 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC18■□□□□ 0.47
NDUFA4O00483 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
NDUFA4O00483 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
NDUFA4O00483 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NDUFA4O00483 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
NDUFA4O00483 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC17.99■□□□□ 0.47
NDUFA4O00483 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
NDUFA4O00483 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NDUFA4O00483 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NDUFA4O00483 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NDUFA4O00483 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
NDUFA4O00483 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC17.98■□□□□ 0.47
NDUFA4O00483 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NDUFA4O00483 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NDUFA4O00483 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC17.98■□□□□ 0.47
NDUFA4O00483 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NDUFA4O00483 AC022616.5-201ENST00000518796 181 ntBASIC17.98■□□□□ 0.47
NDUFA4O00483 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NDUFA4O00483 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC17.98■□□□□ 0.47
NDUFA4O00483 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
NDUFA4O00483 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NDUFA4O00483 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NDUFA4O00483 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
NDUFA4O00483 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NDUFA4O00483 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NDUFA4O00483 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NDUFA4O00483 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC17.97■□□□□ 0.47
NDUFA4O00483 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC17.97■□□□□ 0.47
NDUFA4O00483 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NDUFA4O00483 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC17.97■□□□□ 0.47
NDUFA4O00483 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC17.97■□□□□ 0.47
NDUFA4O00483 AL139125.2-201ENST00000623134 1869 ntBASIC17.97■□□□□ 0.47
NDUFA4O00483 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NDUFA4O00483 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
NDUFA4O00483 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NDUFA4O00483 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NDUFA4O00483 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NDUFA4O00483 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
NDUFA4O00483 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NDUFA4O00483 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC17.96■□□□□ 0.47
NDUFA4O00483 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NDUFA4O00483 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NDUFA4O00483 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NDUFA4O00483 GUK1-208ENST00000366728 842 ntTSL 2 BASIC17.95■□□□□ 0.46
NDUFA4O00483 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC17.95■□□□□ 0.46
NDUFA4O00483 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC17.95■□□□□ 0.46
NDUFA4O00483 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC17.95■□□□□ 0.46
NDUFA4O00483 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NDUFA4O00483 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
NDUFA4O00483 AC090877.2-201ENST00000558441 1738 ntBASIC17.95■□□□□ 0.46
NDUFA4O00483 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
NDUFA4O00483 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NDUFA4O00483 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NDUFA4O00483 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NDUFA4O00483 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC17.94■□□□□ 0.46
NDUFA4O00483 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
NDUFA4O00483 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NDUFA4O00483 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
NDUFA4O00483 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NDUFA4O00483 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC17.94■□□□□ 0.46
NDUFA4O00483 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NDUFA4O00483 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NDUFA4O00483 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NDUFA4O00483 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC17.94■□□□□ 0.46
NDUFA4O00483 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC17.94■□□□□ 0.46
NDUFA4O00483 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC17.94■□□□□ 0.46
NDUFA4O00483 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NDUFA4O00483 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NDUFA4O00483 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
NDUFA4O00483 IDNK-201ENST00000376417 511 ntTSL 5 BASIC17.93■□□□□ 0.46
NDUFA4O00483 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NDUFA4O00483 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC17.93■□□□□ 0.46
NDUFA4O00483 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC17.93■□□□□ 0.46
NDUFA4O00483 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC17.93■□□□□ 0.46
NDUFA4O00483 AL033527.3-201ENST00000566366 1196 ntBASIC17.93■□□□□ 0.46
NDUFA4O00483 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
NDUFA4O00483 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NDUFA4O00483 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NDUFA4O00483 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NDUFA4O00483 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms