Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RTCAO00442 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC22.4■■□□□ 1.18
RTCAO00442 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
RTCAO00442 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
RTCAO00442 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
RTCAO00442 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
RTCAO00442 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
RTCAO00442 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
RTCAO00442 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
RTCAO00442 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RTCAO00442 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RTCAO00442 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
RTCAO00442 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RTCAO00442 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC22.37■■□□□ 1.17
RTCAO00442 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
RTCAO00442 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC22.37■■□□□ 1.17
RTCAO00442 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC22.37■■□□□ 1.17
RTCAO00442 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RTCAO00442 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
RTCAO00442 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC22.36■■□□□ 1.17
RTCAO00442 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RTCAO00442 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RTCAO00442 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
RTCAO00442 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
RTCAO00442 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC22.36■■□□□ 1.17
RTCAO00442 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC22.36■■□□□ 1.17
RTCAO00442 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC22.36■■□□□ 1.17
RTCAO00442 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RTCAO00442 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC22.36■■□□□ 1.17
RTCAO00442 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
RTCAO00442 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RTCAO00442 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
RTCAO00442 AC010980.1-201ENST00000587192 1142 ntBASIC22.35■■□□□ 1.17
RTCAO00442 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
RTCAO00442 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RTCAO00442 AP003733.4-201ENST00000623785 1697 ntBASIC22.35■■□□□ 1.17
RTCAO00442 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
RTCAO00442 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC22.35■■□□□ 1.17
RTCAO00442 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RTCAO00442 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RTCAO00442 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RTCAO00442 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
RTCAO00442 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
RTCAO00442 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC22.34■■□□□ 1.17
RTCAO00442 PVT1_1.1-201ENST00000615125 194 ntBASIC22.34■■□□□ 1.17
RTCAO00442 MIR6089-201ENST00000616698 64 ntBASIC22.34■■□□□ 1.17
RTCAO00442 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
RTCAO00442 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RTCAO00442 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
RTCAO00442 LSR-205ENST00000427250 1606 ntTSL 2 BASIC22.34■■□□□ 1.17
RTCAO00442 AL139125.2-201ENST00000623134 1869 ntBASIC22.34■■□□□ 1.17
RTCAO00442 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RTCAO00442 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC22.34■■□□□ 1.17
RTCAO00442 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RTCAO00442 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RTCAO00442 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RTCAO00442 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
RTCAO00442 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC22.33■■□□□ 1.17
RTCAO00442 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC22.33■■□□□ 1.17
RTCAO00442 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC22.33■■□□□ 1.17
RTCAO00442 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC22.33■■□□□ 1.17
RTCAO00442 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC22.33■■□□□ 1.17
RTCAO00442 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
RTCAO00442 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC22.32■■□□□ 1.16
RTCAO00442 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RTCAO00442 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RTCAO00442 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RTCAO00442 BEX3-202ENST00000372634 753 ntTSL 2 BASIC22.32■■□□□ 1.16
RTCAO00442 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RTCAO00442 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC22.32■■□□□ 1.16
RTCAO00442 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RTCAO00442 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RTCAO00442 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RTCAO00442 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC22.31■■□□□ 1.16
RTCAO00442 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
RTCAO00442 AL592295.1-201ENST00000400984 884 ntBASIC22.31■■□□□ 1.16
RTCAO00442 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC22.31■■□□□ 1.16
RTCAO00442 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RTCAO00442 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RTCAO00442 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RTCAO00442 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
RTCAO00442 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
RTCAO00442 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC22.3■■□□□ 1.16
RTCAO00442 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC22.3■■□□□ 1.16
RTCAO00442 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RTCAO00442 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
RTCAO00442 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RTCAO00442 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC22.3■■□□□ 1.16
RTCAO00442 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC22.3■■□□□ 1.16
RTCAO00442 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
RTCAO00442 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
RTCAO00442 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC22.29■■□□□ 1.16
RTCAO00442 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RTCAO00442 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC22.29■■□□□ 1.16
RTCAO00442 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC22.29■■□□□ 1.16
RTCAO00442 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
RTCAO00442 MTX2-204ENST00000443241 799 ntTSL 3 BASIC22.29■■□□□ 1.16
RTCAO00442 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RTCAO00442 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RTCAO00442 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms