Protein–RNA interactions for Protein: A6NNJ1

FAM90A9P, Putative protein FAM90A9P, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM90A9PA6NNJ1 AC141586.4-201ENST00000624558 1573 ntBASIC19.19■□□□□ 0.66
FAM90A9PA6NNJ1 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FAM90A9PA6NNJ1 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
FAM90A9PA6NNJ1 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FAM90A9PA6NNJ1 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
FAM90A9PA6NNJ1 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
FAM90A9PA6NNJ1 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC19.18■□□□□ 0.66
FAM90A9PA6NNJ1 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FAM90A9PA6NNJ1 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
FAM90A9PA6NNJ1 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
FAM90A9PA6NNJ1 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
FAM90A9PA6NNJ1 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FAM90A9PA6NNJ1 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
FAM90A9PA6NNJ1 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
FAM90A9PA6NNJ1 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FAM90A9PA6NNJ1 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC19.17■□□□□ 0.66
FAM90A9PA6NNJ1 AL033527.3-201ENST00000566366 1196 ntBASIC19.17■□□□□ 0.66
FAM90A9PA6NNJ1 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FAM90A9PA6NNJ1 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
FAM90A9PA6NNJ1 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
FAM90A9PA6NNJ1 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FAM90A9PA6NNJ1 LINC01124-201ENST00000409786 2117 ntBASIC19.16■□□□□ 0.66
FAM90A9PA6NNJ1 GUK1-208ENST00000366728 842 ntTSL 2 BASIC19.16■□□□□ 0.66
FAM90A9PA6NNJ1 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
FAM90A9PA6NNJ1 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
FAM90A9PA6NNJ1 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC19.16■□□□□ 0.66
FAM90A9PA6NNJ1 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC19.16■□□□□ 0.66
FAM90A9PA6NNJ1 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FAM90A9PA6NNJ1 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FAM90A9PA6NNJ1 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FAM90A9PA6NNJ1 LINC00543-201ENST00000567234 1845 ntBASIC19.16■□□□□ 0.66
FAM90A9PA6NNJ1 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
FAM90A9PA6NNJ1 TMEM202-AS1-202ENST00000565181 2325 ntBASIC19.16■□□□□ 0.66
FAM90A9PA6NNJ1 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
FAM90A9PA6NNJ1 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.15■□□□□ 0.66
FAM90A9PA6NNJ1 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.15■□□□□ 0.66
FAM90A9PA6NNJ1 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FAM90A9PA6NNJ1 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FAM90A9PA6NNJ1 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
FAM90A9PA6NNJ1 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
FAM90A9PA6NNJ1 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
FAM90A9PA6NNJ1 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
FAM90A9PA6NNJ1 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
FAM90A9PA6NNJ1 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
FAM90A9PA6NNJ1 HYI-210ENST00000486909 905 ntTSL 5 BASIC19.14■□□□□ 0.65
FAM90A9PA6NNJ1 AC074183.2-201ENST00000623112 922 ntBASIC19.14■□□□□ 0.65
FAM90A9PA6NNJ1 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
FAM90A9PA6NNJ1 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
FAM90A9PA6NNJ1 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
FAM90A9PA6NNJ1 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
FAM90A9PA6NNJ1 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC19.13■□□□□ 0.65
FAM90A9PA6NNJ1 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
FAM90A9PA6NNJ1 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
FAM90A9PA6NNJ1 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC19.13■□□□□ 0.65
FAM90A9PA6NNJ1 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
FAM90A9PA6NNJ1 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.13■□□□□ 0.65
FAM90A9PA6NNJ1 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
FAM90A9PA6NNJ1 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
FAM90A9PA6NNJ1 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
FAM90A9PA6NNJ1 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
FAM90A9PA6NNJ1 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC19.12■□□□□ 0.65
FAM90A9PA6NNJ1 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FAM90A9PA6NNJ1 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC19.12■□□□□ 0.65
FAM90A9PA6NNJ1 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
FAM90A9PA6NNJ1 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FAM90A9PA6NNJ1 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
FAM90A9PA6NNJ1 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
FAM90A9PA6NNJ1 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC19.11■□□□□ 0.65
FAM90A9PA6NNJ1 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC19.11■□□□□ 0.65
FAM90A9PA6NNJ1 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FAM90A9PA6NNJ1 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
FAM90A9PA6NNJ1 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
FAM90A9PA6NNJ1 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
FAM90A9PA6NNJ1 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
FAM90A9PA6NNJ1 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
FAM90A9PA6NNJ1 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
FAM90A9PA6NNJ1 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.1■□□□□ 0.65
FAM90A9PA6NNJ1 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.1■□□□□ 0.65
FAM90A9PA6NNJ1 LONRF2P2-201ENST00000439212 571 ntBASIC19.1■□□□□ 0.65
FAM90A9PA6NNJ1 AC139795.1-202ENST00000500444 432 ntBASIC19.1■□□□□ 0.65
FAM90A9PA6NNJ1 AC019171.1-201ENST00000601251 1056 ntBASIC19.1■□□□□ 0.65
FAM90A9PA6NNJ1 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.1■□□□□ 0.65
FAM90A9PA6NNJ1 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
FAM90A9PA6NNJ1 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
FAM90A9PA6NNJ1 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
FAM90A9PA6NNJ1 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.1■□□□□ 0.65
FAM90A9PA6NNJ1 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
FAM90A9PA6NNJ1 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
FAM90A9PA6NNJ1 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
FAM90A9PA6NNJ1 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
FAM90A9PA6NNJ1 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
FAM90A9PA6NNJ1 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
FAM90A9PA6NNJ1 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
FAM90A9PA6NNJ1 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.09■□□□□ 0.65
FAM90A9PA6NNJ1 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC19.09■□□□□ 0.65
FAM90A9PA6NNJ1 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
FAM90A9PA6NNJ1 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
FAM90A9PA6NNJ1 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
FAM90A9PA6NNJ1 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
FAM90A9PA6NNJ1 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms