Protein–RNA interactions for Protein: A6NCS4

NKX2-6, Homeobox protein Nkx-2.6, humanhuman

Predictions only

Length 301 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-6A6NCS4 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NKX2-6A6NCS4 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NKX2-6A6NCS4 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.89■□□□□ 0.93
NKX2-6A6NCS4 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NKX2-6A6NCS4 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NKX2-6A6NCS4 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.88■□□□□ 0.93
NKX2-6A6NCS4 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.88■□□□□ 0.93
NKX2-6A6NCS4 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.88■□□□□ 0.93
NKX2-6A6NCS4 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NKX2-6A6NCS4 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NKX2-6A6NCS4 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
NKX2-6A6NCS4 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NKX2-6A6NCS4 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NKX2-6A6NCS4 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.88■□□□□ 0.93
NKX2-6A6NCS4 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
NKX2-6A6NCS4 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
NKX2-6A6NCS4 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
NKX2-6A6NCS4 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
NKX2-6A6NCS4 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.88■□□□□ 0.93
NKX2-6A6NCS4 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.88■□□□□ 0.93
NKX2-6A6NCS4 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
NKX2-6A6NCS4 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
NKX2-6A6NCS4 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
NKX2-6A6NCS4 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NKX2-6A6NCS4 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.87■□□□□ 0.93
NKX2-6A6NCS4 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.87■□□□□ 0.93
NKX2-6A6NCS4 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.87■□□□□ 0.93
NKX2-6A6NCS4 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.87■□□□□ 0.93
NKX2-6A6NCS4 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.87■□□□□ 0.93
NKX2-6A6NCS4 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.87■□□□□ 0.93
NKX2-6A6NCS4 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
NKX2-6A6NCS4 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
NKX2-6A6NCS4 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
NKX2-6A6NCS4 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
NKX2-6A6NCS4 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.87■□□□□ 0.93
NKX2-6A6NCS4 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NKX2-6A6NCS4 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NKX2-6A6NCS4 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NKX2-6A6NCS4 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.86■□□□□ 0.93
NKX2-6A6NCS4 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.86■□□□□ 0.93
NKX2-6A6NCS4 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.86■□□□□ 0.93
NKX2-6A6NCS4 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NKX2-6A6NCS4 MIR6724-1-201ENST00000616420 92 ntBASIC20.86■□□□□ 0.93
NKX2-6A6NCS4 MIR6724-2-201ENST00000616483 92 ntBASIC20.86■□□□□ 0.93
NKX2-6A6NCS4 MIR6724-4-201ENST00000617390 92 ntBASIC20.86■□□□□ 0.93
NKX2-6A6NCS4 MIR6724-3-201ENST00000622482 92 ntBASIC20.86■□□□□ 0.93
NKX2-6A6NCS4 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.86■□□□□ 0.93
NKX2-6A6NCS4 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.86■□□□□ 0.93
NKX2-6A6NCS4 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.85■□□□□ 0.93
NKX2-6A6NCS4 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.85■□□□□ 0.93
NKX2-6A6NCS4 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NKX2-6A6NCS4 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.85■□□□□ 0.93
NKX2-6A6NCS4 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
NKX2-6A6NCS4 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NKX2-6A6NCS4 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
NKX2-6A6NCS4 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.84■□□□□ 0.93
NKX2-6A6NCS4 MIR3621-201ENST00000580529 85 ntBASIC20.84■□□□□ 0.93
NKX2-6A6NCS4 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NKX2-6A6NCS4 AC011551.1-201ENST00000614101 683 ntBASIC20.84■□□□□ 0.93
NKX2-6A6NCS4 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
NKX2-6A6NCS4 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.83■□□□□ 0.93
NKX2-6A6NCS4 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
NKX2-6A6NCS4 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
NKX2-6A6NCS4 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
NKX2-6A6NCS4 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.83■□□□□ 0.93
NKX2-6A6NCS4 AL356740.2-201ENST00000601559 647 ntBASIC20.83■□□□□ 0.93
NKX2-6A6NCS4 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
NKX2-6A6NCS4 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NKX2-6A6NCS4 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.83■□□□□ 0.92
NKX2-6A6NCS4 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
NKX2-6A6NCS4 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NKX2-6A6NCS4 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.82■□□□□ 0.92
NKX2-6A6NCS4 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.82■□□□□ 0.92
NKX2-6A6NCS4 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.82■□□□□ 0.92
NKX2-6A6NCS4 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NKX2-6A6NCS4 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NKX2-6A6NCS4 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NKX2-6A6NCS4 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NKX2-6A6NCS4 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.81■□□□□ 0.92
NKX2-6A6NCS4 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NKX2-6A6NCS4 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NKX2-6A6NCS4 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
NKX2-6A6NCS4 AC096631.2-201ENST00000436136 790 ntBASIC20.8■□□□□ 0.92
NKX2-6A6NCS4 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.8■□□□□ 0.92
NKX2-6A6NCS4 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NKX2-6A6NCS4 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.8■□□□□ 0.92
NKX2-6A6NCS4 AC110285.6-201ENST00000617652 491 ntBASIC20.8■□□□□ 0.92
NKX2-6A6NCS4 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.8■□□□□ 0.92
NKX2-6A6NCS4 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NKX2-6A6NCS4 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.8■□□□□ 0.92
NKX2-6A6NCS4 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
NKX2-6A6NCS4 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.79■□□□□ 0.92
NKX2-6A6NCS4 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
NKX2-6A6NCS4 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.79■□□□□ 0.92
NKX2-6A6NCS4 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
NKX2-6A6NCS4 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NKX2-6A6NCS4 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NKX2-6A6NCS4 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.79■□□□□ 0.92
NKX2-6A6NCS4 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NKX2-6A6NCS4 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms