Protein–RNA interactions for Protein: A2RUT3

TMEM89, Transmembrane protein 89, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM89A2RUT3 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM89A2RUT3 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM89A2RUT3 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM89A2RUT3 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC18.8■□□□□ 0.6
TMEM89A2RUT3 TK2-202ENST00000417693 1046 ntTSL 2 BASIC18.8■□□□□ 0.6
TMEM89A2RUT3 SENP5-202ENST00000419026 973 ntTSL 3 BASIC18.8■□□□□ 0.6
TMEM89A2RUT3 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.8■□□□□ 0.6
TMEM89A2RUT3 AC106739.1-201ENST00000617035 715 ntBASIC18.8■□□□□ 0.6
TMEM89A2RUT3 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM89A2RUT3 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM89A2RUT3 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC18.8■□□□□ 0.6
TMEM89A2RUT3 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC18.79■□□□□ 0.6
TMEM89A2RUT3 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM89A2RUT3 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC18.79■□□□□ 0.6
TMEM89A2RUT3 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM89A2RUT3 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC18.79■□□□□ 0.6
TMEM89A2RUT3 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM89A2RUT3 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
TMEM89A2RUT3 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC18.79■□□□□ 0.6
TMEM89A2RUT3 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM89A2RUT3 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC18.78■□□□□ 0.6
TMEM89A2RUT3 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
TMEM89A2RUT3 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TMEM89A2RUT3 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TMEM89A2RUT3 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TMEM89A2RUT3 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TMEM89A2RUT3 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.78■□□□□ 0.6
TMEM89A2RUT3 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TMEM89A2RUT3 AC142381.2-201ENST00000566120 298 ntBASIC18.78■□□□□ 0.6
TMEM89A2RUT3 AC011551.1-201ENST00000614101 683 ntBASIC18.78■□□□□ 0.6
TMEM89A2RUT3 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TMEM89A2RUT3 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TMEM89A2RUT3 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
TMEM89A2RUT3 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TMEM89A2RUT3 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TMEM89A2RUT3 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC18.77■□□□□ 0.6
TMEM89A2RUT3 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TMEM89A2RUT3 PBX2P1-201ENST00000493219 1291 ntBASIC18.77■□□□□ 0.6
TMEM89A2RUT3 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC18.77■□□□□ 0.6
TMEM89A2RUT3 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
TMEM89A2RUT3 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TMEM89A2RUT3 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC18.76■□□□□ 0.59
TMEM89A2RUT3 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC18.76■□□□□ 0.59
TMEM89A2RUT3 AC026271.2-201ENST00000428091 497 ntBASIC18.76■□□□□ 0.59
TMEM89A2RUT3 AC104564.3-201ENST00000582367 638 ntBASIC18.76■□□□□ 0.59
TMEM89A2RUT3 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC18.76■□□□□ 0.59
TMEM89A2RUT3 GAK-223ENST00000628912 497 ntTSL 5 BASIC18.76■□□□□ 0.59
TMEM89A2RUT3 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
TMEM89A2RUT3 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TMEM89A2RUT3 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TMEM89A2RUT3 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMEM89A2RUT3 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMEM89A2RUT3 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMEM89A2RUT3 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18.75■□□□□ 0.59
TMEM89A2RUT3 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
TMEM89A2RUT3 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMEM89A2RUT3 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
TMEM89A2RUT3 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TMEM89A2RUT3 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TMEM89A2RUT3 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
TMEM89A2RUT3 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
TMEM89A2RUT3 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC18.74■□□□□ 0.59
TMEM89A2RUT3 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC18.74■□□□□ 0.59
TMEM89A2RUT3 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TMEM89A2RUT3 PKM-203ENST00000389093 2279 ntTSL 5 BASIC18.74■□□□□ 0.59
TMEM89A2RUT3 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TMEM89A2RUT3 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TMEM89A2RUT3 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TMEM89A2RUT3 MIR5787-201ENST00000611784 55 ntBASIC18.73■□□□□ 0.59
TMEM89A2RUT3 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TMEM89A2RUT3 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TMEM89A2RUT3 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
TMEM89A2RUT3 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TMEM89A2RUT3 AC135279.3-201ENST00000610945 1311 ntBASIC18.73■□□□□ 0.59
TMEM89A2RUT3 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM89A2RUT3 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
TMEM89A2RUT3 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC18.72■□□□□ 0.59
TMEM89A2RUT3 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM89A2RUT3 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM89A2RUT3 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM89A2RUT3 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC18.72■□□□□ 0.59
TMEM89A2RUT3 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
TMEM89A2RUT3 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC18.72■□□□□ 0.59
TMEM89A2RUT3 CLTA-210ENST00000540080 989 ntTSL 2 BASIC18.72■□□□□ 0.59
TMEM89A2RUT3 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM89A2RUT3 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM89A2RUT3 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM89A2RUT3 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM89A2RUT3 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC18.71■□□□□ 0.59
TMEM89A2RUT3 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM89A2RUT3 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM89A2RUT3 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC18.71■□□□□ 0.59
TMEM89A2RUT3 CD72-202ENST00000378430 585 ntTSL 3 BASIC18.71■□□□□ 0.59
TMEM89A2RUT3 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM89A2RUT3 RASSF1-AS1-201ENST00000629828 790 ntBASIC18.71■□□□□ 0.59
TMEM89A2RUT3 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC18.71■□□□□ 0.59
TMEM89A2RUT3 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM89A2RUT3 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC18.7■□□□□ 0.58
TMEM89A2RUT3 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM89A2RUT3 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms