Protein–RNA interactions for Protein: A0A1B0GVV1

SMIM35, Small integral membrane protein 35, humanhuman

Predictions only

Length 85 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM35A0A1B0GVV1 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC25.94■■□□□ 1.74
SMIM35A0A1B0GVV1 AC092803.2-201ENST00000564287 1899 ntBASIC25.94■■□□□ 1.74
SMIM35A0A1B0GVV1 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
SMIM35A0A1B0GVV1 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC25.93■■□□□ 1.74
SMIM35A0A1B0GVV1 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC25.93■■□□□ 1.74
SMIM35A0A1B0GVV1 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
SMIM35A0A1B0GVV1 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
SMIM35A0A1B0GVV1 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC25.93■■□□□ 1.74
SMIM35A0A1B0GVV1 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
SMIM35A0A1B0GVV1 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC25.93■■□□□ 1.74
SMIM35A0A1B0GVV1 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC25.93■■□□□ 1.74
SMIM35A0A1B0GVV1 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC25.93■■□□□ 1.74
SMIM35A0A1B0GVV1 MTDHP2-201ENST00000601468 714 ntBASIC25.93■■□□□ 1.74
SMIM35A0A1B0GVV1 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
SMIM35A0A1B0GVV1 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
SMIM35A0A1B0GVV1 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC25.92■■□□□ 1.74
SMIM35A0A1B0GVV1 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
SMIM35A0A1B0GVV1 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC25.92■■□□□ 1.74
SMIM35A0A1B0GVV1 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC25.92■■□□□ 1.74
SMIM35A0A1B0GVV1 MIR6724-1-201ENST00000616420 92 ntBASIC25.92■■□□□ 1.74
SMIM35A0A1B0GVV1 MIR6724-2-201ENST00000616483 92 ntBASIC25.92■■□□□ 1.74
SMIM35A0A1B0GVV1 MIR6724-4-201ENST00000617390 92 ntBASIC25.92■■□□□ 1.74
SMIM35A0A1B0GVV1 MIR6724-3-201ENST00000622482 92 ntBASIC25.92■■□□□ 1.74
SMIM35A0A1B0GVV1 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC25.92■■□□□ 1.74
SMIM35A0A1B0GVV1 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
SMIM35A0A1B0GVV1 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
SMIM35A0A1B0GVV1 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
SMIM35A0A1B0GVV1 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
SMIM35A0A1B0GVV1 PEMT-206ENST00000435340 960 ntTSL 5 BASIC25.91■■□□□ 1.74
SMIM35A0A1B0GVV1 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC25.91■■□□□ 1.74
SMIM35A0A1B0GVV1 LSM7-203ENST00000585409 512 ntTSL 2 BASIC25.91■■□□□ 1.74
SMIM35A0A1B0GVV1 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC25.91■■□□□ 1.74
SMIM35A0A1B0GVV1 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC25.91■■□□□ 1.74
SMIM35A0A1B0GVV1 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC25.91■■□□□ 1.74
SMIM35A0A1B0GVV1 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
SMIM35A0A1B0GVV1 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC25.91■■□□□ 1.74
SMIM35A0A1B0GVV1 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
SMIM35A0A1B0GVV1 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
SMIM35A0A1B0GVV1 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC25.9■■□□□ 1.74
SMIM35A0A1B0GVV1 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC25.9■■□□□ 1.74
SMIM35A0A1B0GVV1 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
SMIM35A0A1B0GVV1 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC25.9■■□□□ 1.74
SMIM35A0A1B0GVV1 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
SMIM35A0A1B0GVV1 LSM4-201ENST00000252816 986 ntTSL 2 BASIC25.89■■□□□ 1.74
SMIM35A0A1B0GVV1 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC25.89■■□□□ 1.74
SMIM35A0A1B0GVV1 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC25.89■■□□□ 1.74
SMIM35A0A1B0GVV1 CLTA-210ENST00000540080 989 ntTSL 2 BASIC25.89■■□□□ 1.74
SMIM35A0A1B0GVV1 EXOG-217ENST00000630638 197 ntTSL 5 BASIC25.89■■□□□ 1.74
SMIM35A0A1B0GVV1 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.74
SMIM35A0A1B0GVV1 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC25.89■■□□□ 1.73
SMIM35A0A1B0GVV1 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC25.88■■□□□ 1.73
SMIM35A0A1B0GVV1 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
SMIM35A0A1B0GVV1 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
SMIM35A0A1B0GVV1 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
SMIM35A0A1B0GVV1 AL117332.1-201ENST00000622628 974 ntBASIC25.88■■□□□ 1.73
SMIM35A0A1B0GVV1 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
SMIM35A0A1B0GVV1 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC25.87■■□□□ 1.73
SMIM35A0A1B0GVV1 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SMIM35A0A1B0GVV1 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC25.87■■□□□ 1.73
SMIM35A0A1B0GVV1 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
SMIM35A0A1B0GVV1 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
SMIM35A0A1B0GVV1 RPP21-222ENST00000433076 577 ntTSL 2 BASIC25.86■■□□□ 1.73
SMIM35A0A1B0GVV1 SRR-208ENST00000576848 588 ntTSL 4 BASIC25.86■■□□□ 1.73
SMIM35A0A1B0GVV1 MIR3621-201ENST00000580529 85 ntBASIC25.86■■□□□ 1.73
SMIM35A0A1B0GVV1 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC25.86■■□□□ 1.73
SMIM35A0A1B0GVV1 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC25.86■■□□□ 1.73
SMIM35A0A1B0GVV1 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
SMIM35A0A1B0GVV1 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
SMIM35A0A1B0GVV1 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SMIM35A0A1B0GVV1 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
SMIM35A0A1B0GVV1 AC131281.2-201ENST00000520478 145 ntBASIC25.84■■□□□ 1.73
SMIM35A0A1B0GVV1 TRIR-202ENST00000588213 841 ntTSL 3 BASIC25.84■■□□□ 1.73
SMIM35A0A1B0GVV1 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC25.84■■□□□ 1.73
SMIM35A0A1B0GVV1 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC25.83■■□□□ 1.73
SMIM35A0A1B0GVV1 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
SMIM35A0A1B0GVV1 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC25.83■■□□□ 1.73
SMIM35A0A1B0GVV1 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
SMIM35A0A1B0GVV1 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC25.83■■□□□ 1.73
SMIM35A0A1B0GVV1 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
SMIM35A0A1B0GVV1 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC25.82■■□□□ 1.72
SMIM35A0A1B0GVV1 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
SMIM35A0A1B0GVV1 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SMIM35A0A1B0GVV1 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC25.82■■□□□ 1.72
SMIM35A0A1B0GVV1 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC25.82■■□□□ 1.72
SMIM35A0A1B0GVV1 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC25.82■■□□□ 1.72
SMIM35A0A1B0GVV1 AC019069.1-201ENST00000610008 1333 ntBASIC25.82■■□□□ 1.72
SMIM35A0A1B0GVV1 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
SMIM35A0A1B0GVV1 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
SMIM35A0A1B0GVV1 AL356740.2-201ENST00000601559 647 ntBASIC25.81■■□□□ 1.72
SMIM35A0A1B0GVV1 SNX5-217ENST00000606557 1087 ntBASIC25.81■■□□□ 1.72
SMIM35A0A1B0GVV1 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
SMIM35A0A1B0GVV1 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SMIM35A0A1B0GVV1 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC25.8■■□□□ 1.72
SMIM35A0A1B0GVV1 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC25.8■■□□□ 1.72
SMIM35A0A1B0GVV1 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC25.79■■□□□ 1.72
SMIM35A0A1B0GVV1 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC25.79■■□□□ 1.72
SMIM35A0A1B0GVV1 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC25.79■■□□□ 1.72
SMIM35A0A1B0GVV1 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC25.79■■□□□ 1.72
SMIM35A0A1B0GVV1 LBH-205ENST00000407930 756 ntTSL 2 BASIC25.79■■□□□ 1.72
SMIM35A0A1B0GVV1 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC25.79■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms