Protein–RNA interactions for Protein: A0A0B4J273

TRAV34, T-cell receptor alpha variable 34 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV34A0A0B4J273 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.01■□□□□ 0.47
TRAV34A0A0B4J273 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV34A0A0B4J273 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV34A0A0B4J273 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRAV34A0A0B4J273 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV34A0A0B4J273 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
TRAV34A0A0B4J273 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC18■□□□□ 0.47
TRAV34A0A0B4J273 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV34A0A0B4J273 DUX4L29-201ENST00000425409 679 ntBASIC18■□□□□ 0.47
TRAV34A0A0B4J273 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV34A0A0B4J273 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV34A0A0B4J273 AL359258.2-201ENST00000564063 1566 ntBASIC18■□□□□ 0.47
TRAV34A0A0B4J273 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV34A0A0B4J273 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
TRAV34A0A0B4J273 MIR219A2-201ENST00000608502 1504 ntBASIC17.99■□□□□ 0.47
TRAV34A0A0B4J273 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV34A0A0B4J273 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC17.99■□□□□ 0.47
TRAV34A0A0B4J273 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV34A0A0B4J273 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
TRAV34A0A0B4J273 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV34A0A0B4J273 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC17.98■□□□□ 0.47
TRAV34A0A0B4J273 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC17.98■□□□□ 0.47
TRAV34A0A0B4J273 CHML-204ENST00000638121 920 ntTSL 2 BASIC17.98■□□□□ 0.47
TRAV34A0A0B4J273 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV34A0A0B4J273 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC17.98■□□□□ 0.47
TRAV34A0A0B4J273 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV34A0A0B4J273 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV34A0A0B4J273 DUSP8P5-201ENST00000422884 1815 ntBASIC17.98■□□□□ 0.47
TRAV34A0A0B4J273 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV34A0A0B4J273 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV34A0A0B4J273 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
TRAV34A0A0B4J273 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV34A0A0B4J273 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV34A0A0B4J273 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
TRAV34A0A0B4J273 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV34A0A0B4J273 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC17.96■□□□□ 0.47
TRAV34A0A0B4J273 AC141586.4-201ENST00000624558 1573 ntBASIC17.96■□□□□ 0.47
TRAV34A0A0B4J273 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC17.96■□□□□ 0.47
TRAV34A0A0B4J273 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV34A0A0B4J273 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV34A0A0B4J273 AL162393.1-201ENST00000437852 946 ntBASIC17.96■□□□□ 0.47
TRAV34A0A0B4J273 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV34A0A0B4J273 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV34A0A0B4J273 ME2-208ENST00000638937 2471 ntTSL 5 BASIC17.96■□□□□ 0.47
TRAV34A0A0B4J273 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV34A0A0B4J273 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
TRAV34A0A0B4J273 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV34A0A0B4J273 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
TRAV34A0A0B4J273 AC004812.2-201ENST00000611079 2094 ntBASIC17.95■□□□□ 0.46
TRAV34A0A0B4J273 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
TRAV34A0A0B4J273 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV34A0A0B4J273 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV34A0A0B4J273 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV34A0A0B4J273 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV34A0A0B4J273 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV34A0A0B4J273 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV34A0A0B4J273 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
TRAV34A0A0B4J273 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
TRAV34A0A0B4J273 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV34A0A0B4J273 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV34A0A0B4J273 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV34A0A0B4J273 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV34A0A0B4J273 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV34A0A0B4J273 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV34A0A0B4J273 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC17.95■□□□□ 0.46
TRAV34A0A0B4J273 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC17.95■□□□□ 0.46
TRAV34A0A0B4J273 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV34A0A0B4J273 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV34A0A0B4J273 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
TRAV34A0A0B4J273 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV34A0A0B4J273 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV34A0A0B4J273 CHST11-202ENST00000546689 756 ntTSL 2 BASIC17.94■□□□□ 0.46
TRAV34A0A0B4J273 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV34A0A0B4J273 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV34A0A0B4J273 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV34A0A0B4J273 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV34A0A0B4J273 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV34A0A0B4J273 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV34A0A0B4J273 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC17.93■□□□□ 0.46
TRAV34A0A0B4J273 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC17.93■□□□□ 0.46
TRAV34A0A0B4J273 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV34A0A0B4J273 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV34A0A0B4J273 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV34A0A0B4J273 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV34A0A0B4J273 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV34A0A0B4J273 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV34A0A0B4J273 ABCB10P4-201ENST00000566803 2184 ntBASIC17.93■□□□□ 0.46
TRAV34A0A0B4J273 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
TRAV34A0A0B4J273 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV34A0A0B4J273 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV34A0A0B4J273 C9orf163-202ENST00000624034 2573 ntBASIC17.92■□□□□ 0.46
TRAV34A0A0B4J273 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV34A0A0B4J273 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV34A0A0B4J273 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV34A0A0B4J273 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV34A0A0B4J273 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV34A0A0B4J273 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
TRAV34A0A0B4J273 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV34A0A0B4J273 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV34A0A0B4J273 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms