Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC17.36■□□□□ 0.37
TRAV12-3A0A0B4J271 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV12-3A0A0B4J271 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV12-3A0A0B4J271 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV12-3A0A0B4J271 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV12-3A0A0B4J271 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC17.35■□□□□ 0.37
TRAV12-3A0A0B4J271 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV12-3A0A0B4J271 AC133552.2-201ENST00000619106 1032 ntBASIC17.35■□□□□ 0.37
TRAV12-3A0A0B4J271 RNF126P1-201ENST00000567452 1320 ntBASIC17.35■□□□□ 0.37
TRAV12-3A0A0B4J271 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC17.35■□□□□ 0.37
TRAV12-3A0A0B4J271 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV12-3A0A0B4J271 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV12-3A0A0B4J271 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV12-3A0A0B4J271 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV12-3A0A0B4J271 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
TRAV12-3A0A0B4J271 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC17.35■□□□□ 0.37
TRAV12-3A0A0B4J271 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC17.35■□□□□ 0.37
TRAV12-3A0A0B4J271 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV12-3A0A0B4J271 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV12-3A0A0B4J271 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV12-3A0A0B4J271 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV12-3A0A0B4J271 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV12-3A0A0B4J271 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV12-3A0A0B4J271 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV12-3A0A0B4J271 EED-207ENST00000528180 1745 ntTSL 5 BASIC17.34■□□□□ 0.37
TRAV12-3A0A0B4J271 AC009831.1-201ENST00000580420 1582 ntBASIC17.34■□□□□ 0.37
TRAV12-3A0A0B4J271 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
TRAV12-3A0A0B4J271 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC17.33■□□□□ 0.37
TRAV12-3A0A0B4J271 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRAV12-3A0A0B4J271 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAV12-3A0A0B4J271 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAV12-3A0A0B4J271 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAV12-3A0A0B4J271 KRT18P10-201ENST00000388836 1287 ntBASIC17.33■□□□□ 0.36
TRAV12-3A0A0B4J271 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAV12-3A0A0B4J271 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAV12-3A0A0B4J271 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC17.32■□□□□ 0.36
TRAV12-3A0A0B4J271 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC17.32■□□□□ 0.36
TRAV12-3A0A0B4J271 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV12-3A0A0B4J271 THRA-202ENST00000394121 2260 ntTSL 2 BASIC17.32■□□□□ 0.36
TRAV12-3A0A0B4J271 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV12-3A0A0B4J271 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV12-3A0A0B4J271 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV12-3A0A0B4J271 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV12-3A0A0B4J271 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV12-3A0A0B4J271 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV12-3A0A0B4J271 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV12-3A0A0B4J271 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC17.31■□□□□ 0.36
TRAV12-3A0A0B4J271 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV12-3A0A0B4J271 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TRAV12-3A0A0B4J271 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV12-3A0A0B4J271 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC17.3■□□□□ 0.36
TRAV12-3A0A0B4J271 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV12-3A0A0B4J271 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV12-3A0A0B4J271 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV12-3A0A0B4J271 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV12-3A0A0B4J271 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV12-3A0A0B4J271 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV12-3A0A0B4J271 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV12-3A0A0B4J271 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV12-3A0A0B4J271 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
TRAV12-3A0A0B4J271 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV12-3A0A0B4J271 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV12-3A0A0B4J271 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC17.29■□□□□ 0.36
TRAV12-3A0A0B4J271 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC17.29■□□□□ 0.36
TRAV12-3A0A0B4J271 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC17.29■□□□□ 0.36
TRAV12-3A0A0B4J271 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TRAV12-3A0A0B4J271 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC17.29■□□□□ 0.36
TRAV12-3A0A0B4J271 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV12-3A0A0B4J271 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
TRAV12-3A0A0B4J271 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV12-3A0A0B4J271 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV12-3A0A0B4J271 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC17.29■□□□□ 0.36
TRAV12-3A0A0B4J271 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV12-3A0A0B4J271 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV12-3A0A0B4J271 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV12-3A0A0B4J271 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV12-3A0A0B4J271 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TRAV12-3A0A0B4J271 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC17.28■□□□□ 0.36
TRAV12-3A0A0B4J271 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV12-3A0A0B4J271 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV12-3A0A0B4J271 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TRAV12-3A0A0B4J271 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC17.28■□□□□ 0.36
TRAV12-3A0A0B4J271 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV12-3A0A0B4J271 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV12-3A0A0B4J271 FOXO3B-201ENST00000395675 1928 ntBASIC17.27■□□□□ 0.36
TRAV12-3A0A0B4J271 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV12-3A0A0B4J271 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV12-3A0A0B4J271 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.36
TRAV12-3A0A0B4J271 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC17.27■□□□□ 0.36
TRAV12-3A0A0B4J271 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV12-3A0A0B4J271 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC17.27■□□□□ 0.36
TRAV12-3A0A0B4J271 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV12-3A0A0B4J271 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.27■□□□□ 0.36
TRAV12-3A0A0B4J271 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV12-3A0A0B4J271 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRAV12-3A0A0B4J271 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
TRAV12-3A0A0B4J271 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRAV12-3A0A0B4J271 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC17.27■□□□□ 0.35
TRAV12-3A0A0B4J271 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.35
TRAV12-3A0A0B4J271 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms