Protein–RNA interactions for Protein: A0A0A6YYK7

TRAV19, T-cell receptor alpha variable 19 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV19A0A0A6YYK7 SENP5-202ENST00000419026 973 ntTSL 3 BASIC24.46■■□□□ 1.51
TRAV19A0A0A6YYK7 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC24.46■■□□□ 1.51
TRAV19A0A0A6YYK7 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC24.46■■□□□ 1.51
TRAV19A0A0A6YYK7 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC24.46■■□□□ 1.51
TRAV19A0A0A6YYK7 AC010997.5-201ENST00000609182 354 ntBASIC24.46■■□□□ 1.51
TRAV19A0A0A6YYK7 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC24.46■■□□□ 1.51
TRAV19A0A0A6YYK7 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
TRAV19A0A0A6YYK7 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
TRAV19A0A0A6YYK7 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC24.46■■□□□ 1.51
TRAV19A0A0A6YYK7 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
TRAV19A0A0A6YYK7 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
TRAV19A0A0A6YYK7 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
TRAV19A0A0A6YYK7 AC090877.2-201ENST00000558441 1738 ntBASIC24.45■■□□□ 1.5
TRAV19A0A0A6YYK7 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC24.45■■□□□ 1.5
TRAV19A0A0A6YYK7 MTDHP2-201ENST00000601468 714 ntBASIC24.45■■□□□ 1.5
TRAV19A0A0A6YYK7 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC24.45■■□□□ 1.5
TRAV19A0A0A6YYK7 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC24.45■■□□□ 1.5
TRAV19A0A0A6YYK7 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
TRAV19A0A0A6YYK7 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC24.44■■□□□ 1.5
TRAV19A0A0A6YYK7 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC24.44■■□□□ 1.5
TRAV19A0A0A6YYK7 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC24.44■■□□□ 1.5
TRAV19A0A0A6YYK7 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
TRAV19A0A0A6YYK7 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
TRAV19A0A0A6YYK7 AF131216.4-201ENST00000638924 1588 ntBASIC24.43■■□□□ 1.5
TRAV19A0A0A6YYK7 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
TRAV19A0A0A6YYK7 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
TRAV19A0A0A6YYK7 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC24.43■■□□□ 1.5
TRAV19A0A0A6YYK7 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
TRAV19A0A0A6YYK7 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TRAV19A0A0A6YYK7 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
TRAV19A0A0A6YYK7 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
TRAV19A0A0A6YYK7 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TRAV19A0A0A6YYK7 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
TRAV19A0A0A6YYK7 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC24.41■■□□□ 1.5
TRAV19A0A0A6YYK7 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
TRAV19A0A0A6YYK7 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
TRAV19A0A0A6YYK7 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
TRAV19A0A0A6YYK7 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
TRAV19A0A0A6YYK7 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC24.4■■□□□ 1.5
TRAV19A0A0A6YYK7 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
TRAV19A0A0A6YYK7 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
TRAV19A0A0A6YYK7 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
TRAV19A0A0A6YYK7 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.5
TRAV19A0A0A6YYK7 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.5
TRAV19A0A0A6YYK7 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
TRAV19A0A0A6YYK7 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.49
TRAV19A0A0A6YYK7 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
TRAV19A0A0A6YYK7 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.49
TRAV19A0A0A6YYK7 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC24.39■■□□□ 1.49
TRAV19A0A0A6YYK7 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
TRAV19A0A0A6YYK7 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
TRAV19A0A0A6YYK7 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
TRAV19A0A0A6YYK7 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC24.39■■□□□ 1.49
TRAV19A0A0A6YYK7 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.49
TRAV19A0A0A6YYK7 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
TRAV19A0A0A6YYK7 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TRAV19A0A0A6YYK7 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC24.38■■□□□ 1.49
TRAV19A0A0A6YYK7 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TRAV19A0A0A6YYK7 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC24.38■■□□□ 1.49
TRAV19A0A0A6YYK7 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC24.38■■□□□ 1.49
TRAV19A0A0A6YYK7 CLTA-210ENST00000540080 989 ntTSL 2 BASIC24.38■■□□□ 1.49
TRAV19A0A0A6YYK7 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC24.38■■□□□ 1.49
TRAV19A0A0A6YYK7 MIR6724-1-201ENST00000616420 92 ntBASIC24.38■■□□□ 1.49
TRAV19A0A0A6YYK7 MIR6724-2-201ENST00000616483 92 ntBASIC24.38■■□□□ 1.49
TRAV19A0A0A6YYK7 MIR6724-4-201ENST00000617390 92 ntBASIC24.38■■□□□ 1.49
TRAV19A0A0A6YYK7 MIR6724-3-201ENST00000622482 92 ntBASIC24.38■■□□□ 1.49
TRAV19A0A0A6YYK7 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC24.38■■□□□ 1.49
TRAV19A0A0A6YYK7 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TRAV19A0A0A6YYK7 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TRAV19A0A0A6YYK7 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC24.37■■□□□ 1.49
TRAV19A0A0A6YYK7 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
TRAV19A0A0A6YYK7 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC24.37■■□□□ 1.49
TRAV19A0A0A6YYK7 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
TRAV19A0A0A6YYK7 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
TRAV19A0A0A6YYK7 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
TRAV19A0A0A6YYK7 PEMT-206ENST00000435340 960 ntTSL 5 BASIC24.36■■□□□ 1.49
TRAV19A0A0A6YYK7 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC24.36■■□□□ 1.49
TRAV19A0A0A6YYK7 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC24.36■■□□□ 1.49
TRAV19A0A0A6YYK7 EXOG-217ENST00000630638 197 ntTSL 5 BASIC24.36■■□□□ 1.49
TRAV19A0A0A6YYK7 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
TRAV19A0A0A6YYK7 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC24.35■■□□□ 1.49
TRAV19A0A0A6YYK7 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
TRAV19A0A0A6YYK7 LSM4-201ENST00000252816 986 ntTSL 2 BASIC24.35■■□□□ 1.49
TRAV19A0A0A6YYK7 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC24.35■■□□□ 1.49
TRAV19A0A0A6YYK7 SRR-208ENST00000576848 588 ntTSL 4 BASIC24.35■■□□□ 1.49
TRAV19A0A0A6YYK7 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC24.35■■□□□ 1.49
TRAV19A0A0A6YYK7 TRIR-202ENST00000588213 841 ntTSL 3 BASIC24.35■■□□□ 1.49
TRAV19A0A0A6YYK7 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
TRAV19A0A0A6YYK7 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
TRAV19A0A0A6YYK7 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC24.34■■□□□ 1.49
TRAV19A0A0A6YYK7 AL117332.1-201ENST00000622628 974 ntBASIC24.34■■□□□ 1.49
TRAV19A0A0A6YYK7 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC24.34■■□□□ 1.49
TRAV19A0A0A6YYK7 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
TRAV19A0A0A6YYK7 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
TRAV19A0A0A6YYK7 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC24.33■■□□□ 1.49
TRAV19A0A0A6YYK7 RPP21-222ENST00000433076 577 ntTSL 2 BASIC24.33■■□□□ 1.49
TRAV19A0A0A6YYK7 LSM7-203ENST00000585409 512 ntTSL 2 BASIC24.33■■□□□ 1.49
TRAV19A0A0A6YYK7 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TRAV19A0A0A6YYK7 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TRAV19A0A0A6YYK7 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms