Protein–RNA interactions for Protein: Q96LT9

RNPC3, RNA-binding protein 40, humanhuman

Known RBP Predictions only

Length 517 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNPC3Q96LT9 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC32.66■■■□□ 2.82
RNPC3Q96LT9 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
RNPC3Q96LT9 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC32.65■■■□□ 2.82
RNPC3Q96LT9 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC32.65■■■□□ 2.82
RNPC3Q96LT9 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC32.63■■■□□ 2.81
RNPC3Q96LT9 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC32.62■■■□□ 2.81
RNPC3Q96LT9 AL031258.1-201ENST00000623562 325 ntBASIC32.61■■■□□ 2.81
RNPC3Q96LT9 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC32.6■■■□□ 2.81
RNPC3Q96LT9 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC32.59■■■□□ 2.81
RNPC3Q96LT9 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC32.59■■■□□ 2.81
RNPC3Q96LT9 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
RNPC3Q96LT9 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC32.56■■■□□ 2.8
RNPC3Q96LT9 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
RNPC3Q96LT9 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC32.54■■■□□ 2.8
RNPC3Q96LT9 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
RNPC3Q96LT9 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC32.54■■■□□ 2.8
RNPC3Q96LT9 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC32.53■■■□□ 2.8
RNPC3Q96LT9 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC32.49■■■□□ 2.79
RNPC3Q96LT9 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
RNPC3Q96LT9 RARRES2P7-201ENST00000567349 469 ntBASIC32.45■■■□□ 2.79
RNPC3Q96LT9 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
RNPC3Q96LT9 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
RNPC3Q96LT9 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
RNPC3Q96LT9 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC32.36■■■□□ 2.77
RNPC3Q96LT9 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC32.33■■■□□ 2.77
RNPC3Q96LT9 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC32.28■■■□□ 2.76
RNPC3Q96LT9 AC097358.2-201ENST00000607541 1159 ntBASIC32.24■■■□□ 2.75
RNPC3Q96LT9 RPS2P35-201ENST00000443417 897 ntBASIC32.17■■■□□ 2.74
RNPC3Q96LT9 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC32.16■■■□□ 2.74
RNPC3Q96LT9 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC32.15■■■□□ 2.74
RNPC3Q96LT9 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC32.12■■■□□ 2.73
RNPC3Q96LT9 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC32.1■■■□□ 2.73
RNPC3Q96LT9 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC32.09■■■□□ 2.73
RNPC3Q96LT9 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
RNPC3Q96LT9 AC136428.2-201ENST00000563187 214 ntBASIC32.07■■■□□ 2.72
RNPC3Q96LT9 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
RNPC3Q96LT9 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC32.04■■■□□ 2.72
RNPC3Q96LT9 SETD8P1-201ENST00000623146 1180 ntBASIC32.04■■■□□ 2.72
RNPC3Q96LT9 SUZ12P1-203ENST00000578195 985 ntBASIC32.02■■■□□ 2.72
RNPC3Q96LT9 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
RNPC3Q96LT9 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC31.97■■■□□ 2.71
RNPC3Q96LT9 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
RNPC3Q96LT9 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC31.96■■■□□ 2.71
RNPC3Q96LT9 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC31.94■■■□□ 2.7
RNPC3Q96LT9 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC31.93■■■□□ 2.7
RNPC3Q96LT9 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC31.91■■■□□ 2.7
RNPC3Q96LT9 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
RNPC3Q96LT9 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
RNPC3Q96LT9 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
RNPC3Q96LT9 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC31.87■■■□□ 2.69
RNPC3Q96LT9 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC31.86■■■□□ 2.69
RNPC3Q96LT9 KLF16-203ENST00000592313 508 ntTSL 3 BASIC31.85■■■□□ 2.69
RNPC3Q96LT9 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
RNPC3Q96LT9 EBPL-203ENST00000378270 579 ntTSL 2 BASIC31.83■■■□□ 2.69
RNPC3Q96LT9 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
RNPC3Q96LT9 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
RNPC3Q96LT9 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC31.8■■■□□ 2.68
RNPC3Q96LT9 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC31.78■■■□□ 2.68
RNPC3Q96LT9 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC31.77■■■□□ 2.68
RNPC3Q96LT9 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC31.77■■■□□ 2.68
RNPC3Q96LT9 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
RNPC3Q96LT9 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC31.76■■■□□ 2.67
RNPC3Q96LT9 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC31.74■■■□□ 2.67
RNPC3Q96LT9 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC31.73■■■□□ 2.67
RNPC3Q96LT9 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC31.73■■■□□ 2.67
RNPC3Q96LT9 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC31.7■■■□□ 2.67
RNPC3Q96LT9 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
RNPC3Q96LT9 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC31.65■■■□□ 2.66
RNPC3Q96LT9 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC31.65■■■□□ 2.66
RNPC3Q96LT9 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
RNPC3Q96LT9 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
RNPC3Q96LT9 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC31.61■■■□□ 2.65
RNPC3Q96LT9 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
RNPC3Q96LT9 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC31.56■■■□□ 2.64
RNPC3Q96LT9 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
RNPC3Q96LT9 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
RNPC3Q96LT9 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC31.55■■■□□ 2.64
RNPC3Q96LT9 AL162393.1-201ENST00000437852 946 ntBASIC31.52■■■□□ 2.64
RNPC3Q96LT9 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC31.51■■■□□ 2.63
RNPC3Q96LT9 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC31.5■■■□□ 2.63
RNPC3Q96LT9 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
RNPC3Q96LT9 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
RNPC3Q96LT9 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC31.48■■■□□ 2.63
RNPC3Q96LT9 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC31.46■■■□□ 2.63
RNPC3Q96LT9 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC31.46■■■□□ 2.63
RNPC3Q96LT9 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC31.46■■■□□ 2.63
RNPC3Q96LT9 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
RNPC3Q96LT9 AP006261.1-201ENST00000584783 668 ntBASIC31.41■■■□□ 2.62
RNPC3Q96LT9 NRG1-221ENST00000614767 762 ntTSL 5 BASIC31.4■■■□□ 2.62
RNPC3Q96LT9 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
RNPC3Q96LT9 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
RNPC3Q96LT9 CAHM-201ENST00000604200 896 ntBASIC31.38■■■□□ 2.61
RNPC3Q96LT9 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
RNPC3Q96LT9 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
RNPC3Q96LT9 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
RNPC3Q96LT9 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
RNPC3Q96LT9 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
RNPC3Q96LT9 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
RNPC3Q96LT9 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC31.28■■■□□ 2.6
RNPC3Q96LT9 MIR7108-201ENST00000614319 87 ntBASIC31.28■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 8.5 ms