Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC28.07■■■□□ 2.08
SNIP1Q8TAD8 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
SNIP1Q8TAD8 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
SNIP1Q8TAD8 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
SNIP1Q8TAD8 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC27.99■■■□□ 2.07
SNIP1Q8TAD8 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
SNIP1Q8TAD8 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC27.97■■■□□ 2.07
SNIP1Q8TAD8 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
SNIP1Q8TAD8 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC27.96■■■□□ 2.07
SNIP1Q8TAD8 RARRES2P7-201ENST00000567349 469 ntBASIC27.93■■■□□ 2.06
SNIP1Q8TAD8 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC27.89■■■□□ 2.06
SNIP1Q8TAD8 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC27.89■■■□□ 2.06
SNIP1Q8TAD8 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC27.86■■■□□ 2.05
SNIP1Q8TAD8 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC27.8■■■□□ 2.04
SNIP1Q8TAD8 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC27.79■■■□□ 2.04
SNIP1Q8TAD8 AC097358.2-201ENST00000607541 1159 ntBASIC27.75■■■□□ 2.03
SNIP1Q8TAD8 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
SNIP1Q8TAD8 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC27.73■■■□□ 2.03
SNIP1Q8TAD8 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC27.71■■■□□ 2.03
SNIP1Q8TAD8 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
SNIP1Q8TAD8 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC27.67■■■□□ 2.02
SNIP1Q8TAD8 AC136428.2-201ENST00000563187 214 ntBASIC27.66■■■□□ 2.02
SNIP1Q8TAD8 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC27.63■■■□□ 2.01
SNIP1Q8TAD8 RPS2P35-201ENST00000443417 897 ntBASIC27.62■■■□□ 2.01
SNIP1Q8TAD8 SETD8P1-201ENST00000623146 1180 ntBASIC27.62■■■□□ 2.01
SNIP1Q8TAD8 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC27.62■■■□□ 2.01
SNIP1Q8TAD8 SUZ12P1-203ENST00000578195 985 ntBASIC27.61■■■□□ 2.01
SNIP1Q8TAD8 EBPL-203ENST00000378270 579 ntTSL 2 BASIC27.58■■■□□ 2.01
SNIP1Q8TAD8 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
SNIP1Q8TAD8 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
SNIP1Q8TAD8 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
SNIP1Q8TAD8 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC27.56■■■□□ 2
SNIP1Q8TAD8 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
SNIP1Q8TAD8 KLF16-203ENST00000592313 508 ntTSL 3 BASIC27.49■■□□□ 1.99
SNIP1Q8TAD8 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC27.49■■□□□ 1.99
SNIP1Q8TAD8 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC27.48■■□□□ 1.99
SNIP1Q8TAD8 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC27.46■■□□□ 1.99
SNIP1Q8TAD8 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC27.43■■□□□ 1.98
SNIP1Q8TAD8 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC27.43■■□□□ 1.98
SNIP1Q8TAD8 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
SNIP1Q8TAD8 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
SNIP1Q8TAD8 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC27.41■■□□□ 1.98
SNIP1Q8TAD8 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
SNIP1Q8TAD8 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
SNIP1Q8TAD8 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC27.39■■□□□ 1.98
SNIP1Q8TAD8 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC27.38■■□□□ 1.97
SNIP1Q8TAD8 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC27.38■■□□□ 1.97
SNIP1Q8TAD8 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC27.38■■□□□ 1.97
SNIP1Q8TAD8 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
SNIP1Q8TAD8 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC27.34■■□□□ 1.97
SNIP1Q8TAD8 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
SNIP1Q8TAD8 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC27.32■■□□□ 1.96
SNIP1Q8TAD8 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC27.31■■□□□ 1.96
SNIP1Q8TAD8 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC27.29■■□□□ 1.96
SNIP1Q8TAD8 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC27.26■■□□□ 1.95
SNIP1Q8TAD8 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC27.26■■□□□ 1.95
SNIP1Q8TAD8 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
SNIP1Q8TAD8 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
SNIP1Q8TAD8 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC27.25■■□□□ 1.95
SNIP1Q8TAD8 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC27.24■■□□□ 1.95
SNIP1Q8TAD8 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
SNIP1Q8TAD8 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC27.22■■□□□ 1.95
SNIP1Q8TAD8 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC27.21■■□□□ 1.95
SNIP1Q8TAD8 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC27.2■■□□□ 1.94
SNIP1Q8TAD8 AL162393.1-201ENST00000437852 946 ntBASIC27.15■■□□□ 1.94
SNIP1Q8TAD8 AP006261.1-201ENST00000584783 668 ntBASIC27.13■■□□□ 1.93
SNIP1Q8TAD8 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
SNIP1Q8TAD8 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC27.08■■□□□ 1.93
SNIP1Q8TAD8 CAHM-201ENST00000604200 896 ntBASIC27.08■■□□□ 1.93
SNIP1Q8TAD8 NRG1-221ENST00000614767 762 ntTSL 5 BASIC27.06■■□□□ 1.92
SNIP1Q8TAD8 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
SNIP1Q8TAD8 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
SNIP1Q8TAD8 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
SNIP1Q8TAD8 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC27.04■■□□□ 1.92
SNIP1Q8TAD8 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC27.04■■□□□ 1.92
SNIP1Q8TAD8 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC27.04■■□□□ 1.92
SNIP1Q8TAD8 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
SNIP1Q8TAD8 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC27.03■■□□□ 1.92
SNIP1Q8TAD8 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
SNIP1Q8TAD8 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
SNIP1Q8TAD8 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC26.95■■□□□ 1.9
SNIP1Q8TAD8 AL391121.1-201ENST00000607967 1349 ntBASIC26.94■■□□□ 1.9
SNIP1Q8TAD8 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC26.94■■□□□ 1.9
SNIP1Q8TAD8 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
SNIP1Q8TAD8 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
SNIP1Q8TAD8 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
SNIP1Q8TAD8 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
SNIP1Q8TAD8 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC26.9■■□□□ 1.9
SNIP1Q8TAD8 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
SNIP1Q8TAD8 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC26.89■■□□□ 1.9
SNIP1Q8TAD8 HNRNPLP2-201ENST00000568980 1570 ntBASIC26.88■■□□□ 1.89
SNIP1Q8TAD8 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
SNIP1Q8TAD8 MVK-208ENST00000539696 608 ntTSL 5 BASIC26.88■■□□□ 1.89
SNIP1Q8TAD8 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
SNIP1Q8TAD8 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
SNIP1Q8TAD8 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
SNIP1Q8TAD8 MIR7108-201ENST00000614319 87 ntBASIC26.86■■□□□ 1.89
SNIP1Q8TAD8 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
SNIP1Q8TAD8 ILK-212ENST00000532063 1617 ntTSL 2 BASIC26.83■■□□□ 1.88
SNIP1Q8TAD8 ABHD17AP4-201ENST00000411545 909 ntBASIC26.82■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms