Protein–RNA interactions for Protein: Q8NCR6

SMRP1, Spermatid-specific manchette-related protein 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMRP1Q8NCR6 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
SMRP1Q8NCR6 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC31.15■■■□□ 2.58
SMRP1Q8NCR6 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC31.14■■■□□ 2.58
SMRP1Q8NCR6 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC31.14■■■□□ 2.58
SMRP1Q8NCR6 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC31.06■■■□□ 2.56
SMRP1Q8NCR6 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
SMRP1Q8NCR6 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC31.03■■■□□ 2.56
SMRP1Q8NCR6 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC31.03■■■□□ 2.56
SMRP1Q8NCR6 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC31■■■□□ 2.55
SMRP1Q8NCR6 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC31■■■□□ 2.55
SMRP1Q8NCR6 RARRES2P7-201ENST00000567349 469 ntBASIC30.99■■■□□ 2.55
SMRP1Q8NCR6 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
SMRP1Q8NCR6 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
SMRP1Q8NCR6 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC30.96■■■□□ 2.55
SMRP1Q8NCR6 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC30.92■■■□□ 2.54
SMRP1Q8NCR6 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC30.9■■■□□ 2.54
SMRP1Q8NCR6 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC30.87■■■□□ 2.53
SMRP1Q8NCR6 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
SMRP1Q8NCR6 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC30.85■■■□□ 2.53
SMRP1Q8NCR6 AC097358.2-201ENST00000607541 1159 ntBASIC30.79■■■□□ 2.52
SMRP1Q8NCR6 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC30.79■■■□□ 2.52
SMRP1Q8NCR6 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC30.77■■■□□ 2.52
SMRP1Q8NCR6 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC30.74■■■□□ 2.51
SMRP1Q8NCR6 AC136428.2-201ENST00000563187 214 ntBASIC30.73■■■□□ 2.51
SMRP1Q8NCR6 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC30.69■■■□□ 2.5
SMRP1Q8NCR6 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
SMRP1Q8NCR6 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC30.67■■■□□ 2.5
SMRP1Q8NCR6 SETD8P1-201ENST00000623146 1180 ntBASIC30.66■■■□□ 2.5
SMRP1Q8NCR6 EBPL-203ENST00000378270 579 ntTSL 2 BASIC30.65■■■□□ 2.5
SMRP1Q8NCR6 SUZ12P1-203ENST00000578195 985 ntBASIC30.64■■■□□ 2.5
SMRP1Q8NCR6 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC30.64■■■□□ 2.5
SMRP1Q8NCR6 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
SMRP1Q8NCR6 RPS2P35-201ENST00000443417 897 ntBASIC30.61■■■□□ 2.49
SMRP1Q8NCR6 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
SMRP1Q8NCR6 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC30.59■■■□□ 2.49
SMRP1Q8NCR6 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
SMRP1Q8NCR6 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
SMRP1Q8NCR6 KLF16-203ENST00000592313 508 ntTSL 3 BASIC30.54■■■□□ 2.48
SMRP1Q8NCR6 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC30.52■■■□□ 2.48
SMRP1Q8NCR6 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC30.51■■■□□ 2.48
SMRP1Q8NCR6 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC30.51■■■□□ 2.47
SMRP1Q8NCR6 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC30.48■■■□□ 2.47
SMRP1Q8NCR6 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
SMRP1Q8NCR6 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
SMRP1Q8NCR6 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC30.44■■■□□ 2.46
SMRP1Q8NCR6 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC30.44■■■□□ 2.46
SMRP1Q8NCR6 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
SMRP1Q8NCR6 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC30.43■■■□□ 2.46
SMRP1Q8NCR6 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
SMRP1Q8NCR6 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC30.42■■■□□ 2.46
SMRP1Q8NCR6 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC30.4■■■□□ 2.46
SMRP1Q8NCR6 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC30.38■■■□□ 2.45
SMRP1Q8NCR6 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
SMRP1Q8NCR6 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC30.35■■■□□ 2.45
SMRP1Q8NCR6 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
SMRP1Q8NCR6 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC30.33■■■□□ 2.45
SMRP1Q8NCR6 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC30.32■■■□□ 2.44
SMRP1Q8NCR6 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC30.31■■■□□ 2.44
SMRP1Q8NCR6 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC30.3■■■□□ 2.44
SMRP1Q8NCR6 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
SMRP1Q8NCR6 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
SMRP1Q8NCR6 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC30.18■■■□□ 2.42
SMRP1Q8NCR6 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
SMRP1Q8NCR6 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC30.14■■■□□ 2.42
SMRP1Q8NCR6 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
SMRP1Q8NCR6 AL162393.1-201ENST00000437852 946 ntBASIC30.12■■■□□ 2.41
SMRP1Q8NCR6 CAHM-201ENST00000604200 896 ntBASIC30.11■■■□□ 2.41
SMRP1Q8NCR6 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
SMRP1Q8NCR6 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC30.08■■■□□ 2.41
SMRP1Q8NCR6 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
SMRP1Q8NCR6 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
SMRP1Q8NCR6 NRG1-221ENST00000614767 762 ntTSL 5 BASIC30.06■■■□□ 2.4
SMRP1Q8NCR6 AP006261.1-201ENST00000584783 668 ntBASIC30.05■■■□□ 2.4
SMRP1Q8NCR6 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC30.01■■■□□ 2.4
SMRP1Q8NCR6 ILK-212ENST00000532063 1617 ntTSL 2 BASIC30.01■■■□□ 2.39
SMRP1Q8NCR6 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
SMRP1Q8NCR6 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
SMRP1Q8NCR6 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
SMRP1Q8NCR6 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC29.99■■■□□ 2.39
SMRP1Q8NCR6 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
SMRP1Q8NCR6 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC29.99■■■□□ 2.39
SMRP1Q8NCR6 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC29.99■■■□□ 2.39
SMRP1Q8NCR6 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC29.96■■■□□ 2.39
SMRP1Q8NCR6 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC29.96■■■□□ 2.39
SMRP1Q8NCR6 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC29.95■■■□□ 2.39
SMRP1Q8NCR6 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC29.95■■■□□ 2.39
SMRP1Q8NCR6 AL391121.1-201ENST00000607967 1349 ntBASIC29.94■■■□□ 2.38
SMRP1Q8NCR6 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
SMRP1Q8NCR6 MVK-208ENST00000539696 608 ntTSL 5 BASIC29.93■■■□□ 2.38
SMRP1Q8NCR6 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC29.93■■■□□ 2.38
SMRP1Q8NCR6 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
SMRP1Q8NCR6 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC29.88■■■□□ 2.37
SMRP1Q8NCR6 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC29.88■■■□□ 2.37
SMRP1Q8NCR6 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
SMRP1Q8NCR6 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
SMRP1Q8NCR6 AC145285.7-201ENST00000614819 1539 ntBASIC29.86■■■□□ 2.37
SMRP1Q8NCR6 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
SMRP1Q8NCR6 HNRNPLP2-201ENST00000568980 1570 ntBASIC29.83■■■□□ 2.37
SMRP1Q8NCR6 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
SMRP1Q8NCR6 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms