Protein–RNA interactions for Protein: Q8NC42

RNF149, E3 ubiquitin-protein ligase RNF149, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF149Q8NC42 DYNLL1-208ENST00000550178 581 ntBASIC32.03■■■□□ 2.72
RNF149Q8NC42 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
RNF149Q8NC42 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC31.97■■■□□ 2.71
RNF149Q8NC42 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
RNF149Q8NC42 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC31.95■■■□□ 2.71
RNF149Q8NC42 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC31.95■■■□□ 2.71
RNF149Q8NC42 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC31.94■■■□□ 2.7
RNF149Q8NC42 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC31.91■■■□□ 2.7
RNF149Q8NC42 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
RNF149Q8NC42 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC31.88■■■□□ 2.69
RNF149Q8NC42 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC31.86■■■□□ 2.69
RNF149Q8NC42 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
RNF149Q8NC42 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
RNF149Q8NC42 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC31.81■■■□□ 2.68
RNF149Q8NC42 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC31.79■■■□□ 2.68
RNF149Q8NC42 AL031258.1-201ENST00000623562 325 ntBASIC31.79■■■□□ 2.68
RNF149Q8NC42 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC31.78■■■□□ 2.68
RNF149Q8NC42 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
RNF149Q8NC42 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC31.77■■■□□ 2.68
RNF149Q8NC42 AC145285.7-201ENST00000614819 1539 ntBASIC31.76■■■□□ 2.68
RNF149Q8NC42 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC31.76■■■□□ 2.67
RNF149Q8NC42 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
RNF149Q8NC42 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC31.74■■■□□ 2.67
RNF149Q8NC42 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
RNF149Q8NC42 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC31.73■■■□□ 2.67
RNF149Q8NC42 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
RNF149Q8NC42 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
RNF149Q8NC42 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
RNF149Q8NC42 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC31.65■■■□□ 2.66
RNF149Q8NC42 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC31.64■■■□□ 2.66
RNF149Q8NC42 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC31.64■■■□□ 2.66
RNF149Q8NC42 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC31.63■■■□□ 2.65
RNF149Q8NC42 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
RNF149Q8NC42 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC31.6■■■□□ 2.65
RNF149Q8NC42 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC31.59■■■□□ 2.65
RNF149Q8NC42 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC31.58■■■□□ 2.65
RNF149Q8NC42 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
RNF149Q8NC42 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
RNF149Q8NC42 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC31.53■■■□□ 2.64
RNF149Q8NC42 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC31.5■■■□□ 2.63
RNF149Q8NC42 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC31.5■■■□□ 2.63
RNF149Q8NC42 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
RNF149Q8NC42 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC31.48■■■□□ 2.63
RNF149Q8NC42 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC31.47■■■□□ 2.63
RNF149Q8NC42 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC31.43■■■□□ 2.62
RNF149Q8NC42 EBPL-203ENST00000378270 579 ntTSL 2 BASIC31.42■■■□□ 2.62
RNF149Q8NC42 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
RNF149Q8NC42 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
RNF149Q8NC42 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC31.35■■■□□ 2.61
RNF149Q8NC42 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC31.34■■■□□ 2.61
RNF149Q8NC42 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC31.31■■■□□ 2.6
RNF149Q8NC42 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
RNF149Q8NC42 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC31.3■■■□□ 2.6
RNF149Q8NC42 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC31.29■■■□□ 2.6
RNF149Q8NC42 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
RNF149Q8NC42 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
RNF149Q8NC42 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC31.27■■■□□ 2.6
RNF149Q8NC42 MVK-208ENST00000539696 608 ntTSL 5 BASIC31.26■■■□□ 2.59
RNF149Q8NC42 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC31.25■■■□□ 2.59
RNF149Q8NC42 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
RNF149Q8NC42 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC31.23■■■□□ 2.59
RNF149Q8NC42 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
RNF149Q8NC42 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC31.21■■■□□ 2.59
RNF149Q8NC42 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
RNF149Q8NC42 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC31.18■■■□□ 2.58
RNF149Q8NC42 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
RNF149Q8NC42 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC31.14■■■□□ 2.58
RNF149Q8NC42 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC31.14■■■□□ 2.58
RNF149Q8NC42 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC31.13■■■□□ 2.57
RNF149Q8NC42 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC31.13■■■□□ 2.57
RNF149Q8NC42 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
RNF149Q8NC42 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC31.1■■■□□ 2.57
RNF149Q8NC42 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC31.1■■■□□ 2.57
RNF149Q8NC42 RARRES2P7-201ENST00000567349 469 ntBASIC31.09■■■□□ 2.57
RNF149Q8NC42 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC31.07■■■□□ 2.56
RNF149Q8NC42 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
RNF149Q8NC42 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
RNF149Q8NC42 KLF16-203ENST00000592313 508 ntTSL 3 BASIC31.03■■■□□ 2.56
RNF149Q8NC42 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
RNF149Q8NC42 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC30.97■■■□□ 2.55
RNF149Q8NC42 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC30.97■■■□□ 2.55
RNF149Q8NC42 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
RNF149Q8NC42 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
RNF149Q8NC42 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC30.93■■■□□ 2.54
RNF149Q8NC42 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC30.91■■■□□ 2.54
RNF149Q8NC42 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
RNF149Q8NC42 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC30.89■■■□□ 2.54
RNF149Q8NC42 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC30.88■■■□□ 2.53
RNF149Q8NC42 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC30.88■■■□□ 2.53
RNF149Q8NC42 SETD8P1-201ENST00000623146 1180 ntBASIC30.88■■■□□ 2.53
RNF149Q8NC42 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
RNF149Q8NC42 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC30.86■■■□□ 2.53
RNF149Q8NC42 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
RNF149Q8NC42 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC30.81■■■□□ 2.52
RNF149Q8NC42 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC30.81■■■□□ 2.52
RNF149Q8NC42 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
RNF149Q8NC42 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
RNF149Q8NC42 AC097358.2-201ENST00000607541 1159 ntBASIC30.79■■■□□ 2.52
RNF149Q8NC42 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC30.79■■■□□ 2.52
RNF149Q8NC42 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms