Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
RAB43Q86YS6 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC27.42■■□□□ 1.98
RAB43Q86YS6 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC27.41■■□□□ 1.98
RAB43Q86YS6 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
RAB43Q86YS6 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
RAB43Q86YS6 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
RAB43Q86YS6 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
RAB43Q86YS6 ILK-212ENST00000532063 1617 ntTSL 2 BASIC27.33■■□□□ 1.97
RAB43Q86YS6 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
RAB43Q86YS6 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC27.29■■□□□ 1.96
RAB43Q86YS6 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC27.25■■□□□ 1.95
RAB43Q86YS6 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
RAB43Q86YS6 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC27.24■■□□□ 1.95
RAB43Q86YS6 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
RAB43Q86YS6 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC27.23■■□□□ 1.95
RAB43Q86YS6 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
RAB43Q86YS6 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
RAB43Q86YS6 AL031258.1-201ENST00000623562 325 ntBASIC27.21■■□□□ 1.95
RAB43Q86YS6 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
RAB43Q86YS6 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC27.15■■□□□ 1.94
RAB43Q86YS6 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
RAB43Q86YS6 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
RAB43Q86YS6 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
RAB43Q86YS6 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
RAB43Q86YS6 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC27.08■■□□□ 1.93
RAB43Q86YS6 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC27.08■■□□□ 1.93
RAB43Q86YS6 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC27.06■■□□□ 1.92
RAB43Q86YS6 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC27.04■■□□□ 1.92
RAB43Q86YS6 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
RAB43Q86YS6 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
RAB43Q86YS6 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC27.02■■□□□ 1.92
RAB43Q86YS6 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC27.01■■□□□ 1.91
RAB43Q86YS6 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC27■■□□□ 1.91
RAB43Q86YS6 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC26.99■■□□□ 1.91
RAB43Q86YS6 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
RAB43Q86YS6 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC26.97■■□□□ 1.91
RAB43Q86YS6 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC26.96■■□□□ 1.91
RAB43Q86YS6 EBPL-203ENST00000378270 579 ntTSL 2 BASIC26.91■■□□□ 1.9
RAB43Q86YS6 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC26.89■■□□□ 1.9
RAB43Q86YS6 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC26.88■■□□□ 1.89
RAB43Q86YS6 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC26.87■■□□□ 1.89
RAB43Q86YS6 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
RAB43Q86YS6 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC26.86■■□□□ 1.89
RAB43Q86YS6 RARRES2P7-201ENST00000567349 469 ntBASIC26.85■■□□□ 1.89
RAB43Q86YS6 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
RAB43Q86YS6 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
RAB43Q86YS6 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC26.83■■□□□ 1.88
RAB43Q86YS6 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
RAB43Q86YS6 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC26.8■■□□□ 1.88
RAB43Q86YS6 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
RAB43Q86YS6 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC26.79■■□□□ 1.88
RAB43Q86YS6 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
RAB43Q86YS6 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC26.74■■□□□ 1.87
RAB43Q86YS6 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC26.73■■□□□ 1.87
RAB43Q86YS6 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
RAB43Q86YS6 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
RAB43Q86YS6 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC26.7■■□□□ 1.86
RAB43Q86YS6 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
RAB43Q86YS6 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC26.69■■□□□ 1.86
RAB43Q86YS6 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
RAB43Q86YS6 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC26.68■■□□□ 1.86
RAB43Q86YS6 AC145285.7-201ENST00000614819 1539 ntBASIC26.66■■□□□ 1.86
RAB43Q86YS6 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC26.66■■□□□ 1.86
RAB43Q86YS6 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC26.66■■□□□ 1.86
RAB43Q86YS6 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC26.66■■□□□ 1.86
RAB43Q86YS6 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC26.65■■□□□ 1.86
RAB43Q86YS6 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC26.65■■□□□ 1.86
RAB43Q86YS6 KLF16-203ENST00000592313 508 ntTSL 3 BASIC26.65■■□□□ 1.86
RAB43Q86YS6 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
RAB43Q86YS6 MVK-208ENST00000539696 608 ntTSL 5 BASIC26.62■■□□□ 1.85
RAB43Q86YS6 SETD8P1-201ENST00000623146 1180 ntBASIC26.6■■□□□ 1.85
RAB43Q86YS6 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC26.59■■□□□ 1.85
RAB43Q86YS6 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC26.58■■□□□ 1.85
RAB43Q86YS6 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC26.58■■□□□ 1.85
RAB43Q86YS6 AC097358.2-201ENST00000607541 1159 ntBASIC26.57■■□□□ 1.84
RAB43Q86YS6 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC26.57■■□□□ 1.84
RAB43Q86YS6 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
RAB43Q86YS6 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
RAB43Q86YS6 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC26.55■■□□□ 1.84
RAB43Q86YS6 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC26.54■■□□□ 1.84
RAB43Q86YS6 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC26.54■■□□□ 1.84
RAB43Q86YS6 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC26.54■■□□□ 1.84
RAB43Q86YS6 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
RAB43Q86YS6 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC26.47■■□□□ 1.83
RAB43Q86YS6 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
RAB43Q86YS6 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
RAB43Q86YS6 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC26.45■■□□□ 1.83
RAB43Q86YS6 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
RAB43Q86YS6 AC136428.2-201ENST00000563187 214 ntBASIC26.45■■□□□ 1.82
RAB43Q86YS6 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
RAB43Q86YS6 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC26.44■■□□□ 1.82
RAB43Q86YS6 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC26.42■■□□□ 1.82
RAB43Q86YS6 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
RAB43Q86YS6 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC26.39■■□□□ 1.82
RAB43Q86YS6 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC26.39■■□□□ 1.81
RAB43Q86YS6 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RAB43Q86YS6 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
RAB43Q86YS6 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
RAB43Q86YS6 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
RAB43Q86YS6 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms