Protein–RNA interactions for Protein: Q5TKA1

LIN9, Protein lin-9 homolog, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN9Q5TKA1 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
LIN9Q5TKA1 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC31.3■■■□□ 2.6
LIN9Q5TKA1 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC31.24■■■□□ 2.59
LIN9Q5TKA1 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
LIN9Q5TKA1 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC31.24■■■□□ 2.59
LIN9Q5TKA1 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC31.22■■■□□ 2.59
LIN9Q5TKA1 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
LIN9Q5TKA1 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
LIN9Q5TKA1 DYNLL1-208ENST00000550178 581 ntBASIC31.17■■■□□ 2.58
LIN9Q5TKA1 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC31.17■■■□□ 2.58
LIN9Q5TKA1 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC31.12■■■□□ 2.57
LIN9Q5TKA1 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
LIN9Q5TKA1 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC31.08■■■□□ 2.57
LIN9Q5TKA1 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC31.07■■■□□ 2.57
LIN9Q5TKA1 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
LIN9Q5TKA1 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC31.05■■■□□ 2.56
LIN9Q5TKA1 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC31.05■■■□□ 2.56
LIN9Q5TKA1 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
LIN9Q5TKA1 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC31.02■■■□□ 2.56
LIN9Q5TKA1 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
LIN9Q5TKA1 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
LIN9Q5TKA1 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
LIN9Q5TKA1 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC30.94■■■□□ 2.54
LIN9Q5TKA1 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
LIN9Q5TKA1 AL031258.1-201ENST00000623562 325 ntBASIC30.9■■■□□ 2.54
LIN9Q5TKA1 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
LIN9Q5TKA1 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC30.88■■■□□ 2.53
LIN9Q5TKA1 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC30.87■■■□□ 2.53
LIN9Q5TKA1 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC30.85■■■□□ 2.53
LIN9Q5TKA1 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC30.83■■■□□ 2.53
LIN9Q5TKA1 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
LIN9Q5TKA1 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
LIN9Q5TKA1 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC30.81■■■□□ 2.52
LIN9Q5TKA1 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
LIN9Q5TKA1 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
LIN9Q5TKA1 AC145285.7-201ENST00000614819 1539 ntBASIC30.79■■■□□ 2.52
LIN9Q5TKA1 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC30.77■■■□□ 2.52
LIN9Q5TKA1 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC30.77■■■□□ 2.52
LIN9Q5TKA1 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC30.73■■■□□ 2.51
LIN9Q5TKA1 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
LIN9Q5TKA1 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC30.69■■■□□ 2.5
LIN9Q5TKA1 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
LIN9Q5TKA1 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC30.66■■■□□ 2.5
LIN9Q5TKA1 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
LIN9Q5TKA1 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
LIN9Q5TKA1 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC30.59■■■□□ 2.49
LIN9Q5TKA1 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
LIN9Q5TKA1 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC30.56■■■□□ 2.48
LIN9Q5TKA1 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC30.55■■■□□ 2.48
LIN9Q5TKA1 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC30.54■■■□□ 2.48
LIN9Q5TKA1 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC30.54■■■□□ 2.48
LIN9Q5TKA1 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC30.53■■■□□ 2.48
LIN9Q5TKA1 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC30.53■■■□□ 2.48
LIN9Q5TKA1 RARRES2P7-201ENST00000567349 469 ntBASIC30.51■■■□□ 2.47
LIN9Q5TKA1 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
LIN9Q5TKA1 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
LIN9Q5TKA1 EBPL-203ENST00000378270 579 ntTSL 2 BASIC30.48■■■□□ 2.47
LIN9Q5TKA1 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
LIN9Q5TKA1 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC30.47■■■□□ 2.47
LIN9Q5TKA1 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
LIN9Q5TKA1 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
LIN9Q5TKA1 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC30.44■■■□□ 2.46
LIN9Q5TKA1 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC30.43■■■□□ 2.46
LIN9Q5TKA1 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC30.41■■■□□ 2.46
LIN9Q5TKA1 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC30.4■■■□□ 2.46
LIN9Q5TKA1 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC30.39■■■□□ 2.46
LIN9Q5TKA1 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC30.39■■■□□ 2.46
LIN9Q5TKA1 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC30.38■■■□□ 2.45
LIN9Q5TKA1 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC30.38■■■□□ 2.45
LIN9Q5TKA1 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC30.37■■■□□ 2.45
LIN9Q5TKA1 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
LIN9Q5TKA1 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
LIN9Q5TKA1 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC30.34■■■□□ 2.45
LIN9Q5TKA1 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC30.34■■■□□ 2.45
LIN9Q5TKA1 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC30.31■■■□□ 2.44
LIN9Q5TKA1 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
LIN9Q5TKA1 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
LIN9Q5TKA1 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
LIN9Q5TKA1 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC30.3■■■□□ 2.44
LIN9Q5TKA1 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
LIN9Q5TKA1 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
LIN9Q5TKA1 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
LIN9Q5TKA1 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
LIN9Q5TKA1 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC30.27■■■□□ 2.44
LIN9Q5TKA1 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
LIN9Q5TKA1 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
LIN9Q5TKA1 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
LIN9Q5TKA1 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
LIN9Q5TKA1 KLF16-203ENST00000592313 508 ntTSL 3 BASIC30.24■■■□□ 2.43
LIN9Q5TKA1 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC30.23■■■□□ 2.43
LIN9Q5TKA1 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
LIN9Q5TKA1 AC097358.2-201ENST00000607541 1159 ntBASIC30.22■■■□□ 2.43
LIN9Q5TKA1 SETD8P1-201ENST00000623146 1180 ntBASIC30.22■■■□□ 2.43
LIN9Q5TKA1 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC30.22■■■□□ 2.43
LIN9Q5TKA1 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC30.19■■■□□ 2.42
LIN9Q5TKA1 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
LIN9Q5TKA1 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC30.14■■■□□ 2.42
LIN9Q5TKA1 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC30.12■■■□□ 2.41
LIN9Q5TKA1 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC30.12■■■□□ 2.41
LIN9Q5TKA1 MVK-208ENST00000539696 608 ntTSL 5 BASIC30.11■■■□□ 2.41
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms